Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 NUDT16P1-203ENST00000513809 620 ntBASIC18.67■□□□□ 0.58
HMGCLL1Q8TB92 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.67■□□□□ 0.58
HMGCLL1Q8TB92 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.67■□□□□ 0.58
HMGCLL1Q8TB92 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.67■□□□□ 0.58
HMGCLL1Q8TB92 AL031598.1-201ENST00000561511 1773 ntBASIC18.67■□□□□ 0.58
HMGCLL1Q8TB92 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
HMGCLL1Q8TB92 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCLL1Q8TB92 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCLL1Q8TB92 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.67■□□□□ 0.58
HMGCLL1Q8TB92 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCLL1Q8TB92 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLL1Q8TB92 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.66■□□□□ 0.58
HMGCLL1Q8TB92 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLL1Q8TB92 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLL1Q8TB92 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HMGCLL1Q8TB92 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLL1Q8TB92 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HMGCLL1Q8TB92 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLL1Q8TB92 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLL1Q8TB92 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.66■□□□□ 0.58
HMGCLL1Q8TB92 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLL1Q8TB92 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLL1Q8TB92 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
HMGCLL1Q8TB92 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.66■□□□□ 0.58
HMGCLL1Q8TB92 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.66■□□□□ 0.58
HMGCLL1Q8TB92 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.66■□□□□ 0.58
HMGCLL1Q8TB92 AC116562.2-201ENST00000507042 360 ntBASIC18.66■□□□□ 0.58
HMGCLL1Q8TB92 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.66■□□□□ 0.58
HMGCLL1Q8TB92 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLL1Q8TB92 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.66■□□□□ 0.58
HMGCLL1Q8TB92 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.66■□□□□ 0.58
HMGCLL1Q8TB92 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HMGCLL1Q8TB92 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLL1Q8TB92 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLL1Q8TB92 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLL1Q8TB92 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HMGCLL1Q8TB92 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLL1Q8TB92 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCLL1Q8TB92 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCLL1Q8TB92 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.65■□□□□ 0.58
HMGCLL1Q8TB92 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCLL1Q8TB92 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCLL1Q8TB92 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HMGCLL1Q8TB92 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.65■□□□□ 0.58
HMGCLL1Q8TB92 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCLL1Q8TB92 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.65■□□□□ 0.58
HMGCLL1Q8TB92 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.65■□□□□ 0.58
HMGCLL1Q8TB92 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
HMGCLL1Q8TB92 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.65■□□□□ 0.58
HMGCLL1Q8TB92 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.65■□□□□ 0.58
HMGCLL1Q8TB92 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.65■□□□□ 0.58
HMGCLL1Q8TB92 MIR4497-201ENST00000583208 89 ntBASIC18.65■□□□□ 0.58
HMGCLL1Q8TB92 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.65■□□□□ 0.58
HMGCLL1Q8TB92 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.65■□□□□ 0.58
HMGCLL1Q8TB92 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.65■□□□□ 0.58
HMGCLL1Q8TB92 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.65■□□□□ 0.58
HMGCLL1Q8TB92 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.65■□□□□ 0.58
HMGCLL1Q8TB92 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
HMGCLL1Q8TB92 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCLL1Q8TB92 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCLL1Q8TB92 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCLL1Q8TB92 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.65■□□□□ 0.58
HMGCLL1Q8TB92 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
HMGCLL1Q8TB92 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HMGCLL1Q8TB92 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCLL1Q8TB92 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCLL1Q8TB92 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HMGCLL1Q8TB92 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.64■□□□□ 0.57
HMGCLL1Q8TB92 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.64■□□□□ 0.57
HMGCLL1Q8TB92 MIR4785-201ENST00000585005 73 ntBASIC18.64■□□□□ 0.57
HMGCLL1Q8TB92 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.64■□□□□ 0.57
HMGCLL1Q8TB92 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.64■□□□□ 0.57
HMGCLL1Q8TB92 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.64■□□□□ 0.57
HMGCLL1Q8TB92 AC026471.5-201ENST00000615068 467 ntBASIC18.64■□□□□ 0.57
HMGCLL1Q8TB92 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCLL1Q8TB92 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.64■□□□□ 0.57
HMGCLL1Q8TB92 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
HMGCLL1Q8TB92 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
HMGCLL1Q8TB92 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCLL1Q8TB92 FSCN1P1-201ENST00000568912 1481 ntBASIC18.64■□□□□ 0.57
HMGCLL1Q8TB92 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.64■□□□□ 0.57
HMGCLL1Q8TB92 KRT8P41-201ENST00000533985 1514 ntBASIC18.64■□□□□ 0.57
HMGCLL1Q8TB92 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HMGCLL1Q8TB92 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCLL1Q8TB92 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms