Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SVIPQ8NHG7 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SVIPQ8NHG7 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SVIPQ8NHG7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SVIPQ8NHG7 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SVIPQ8NHG7 LINC00896-202ENST00000609602 2128 ntBASIC11.95□□□□□ -0.5
SVIPQ8NHG7 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
SVIPQ8NHG7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SVIPQ8NHG7 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SVIPQ8NHG7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SVIPQ8NHG7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC11.95□□□□□ -0.5
SVIPQ8NHG7 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SVIPQ8NHG7 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SVIPQ8NHG7 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
SVIPQ8NHG7 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC11.95□□□□□ -0.5
SVIPQ8NHG7 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
SVIPQ8NHG7 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC11.95□□□□□ -0.5
SVIPQ8NHG7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
SVIPQ8NHG7 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SVIPQ8NHG7 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
SVIPQ8NHG7 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC11.95□□□□□ -0.5
SVIPQ8NHG7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SVIPQ8NHG7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
SVIPQ8NHG7 ARHGAP23P1-201ENST00000562773 1937 ntBASIC11.95□□□□□ -0.5
SVIPQ8NHG7 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SVIPQ8NHG7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
SVIPQ8NHG7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SVIPQ8NHG7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SVIPQ8NHG7 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
SVIPQ8NHG7 AC092135.3-201ENST00000624151 1846 ntBASIC11.95□□□□□ -0.5
SVIPQ8NHG7 AC104640.1-201ENST00000562617 2109 ntBASIC11.95□□□□□ -0.5
SVIPQ8NHG7 AC037459.3-201ENST00000521025 2750 ntBASIC11.95□□□□□ -0.5
SVIPQ8NHG7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SVIPQ8NHG7 SALL4P5-201ENST00000419001 1760 ntBASIC11.95□□□□□ -0.5
SVIPQ8NHG7 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC11.95□□□□□ -0.5
SVIPQ8NHG7 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SVIPQ8NHG7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC11.94□□□□□ -0.5
SVIPQ8NHG7 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SVIPQ8NHG7 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SVIPQ8NHG7 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SVIPQ8NHG7 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
SVIPQ8NHG7 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SVIPQ8NHG7 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC11.94□□□□□ -0.5
SVIPQ8NHG7 CICP16-201ENST00000502609 2813 ntBASIC11.94□□□□□ -0.5
SVIPQ8NHG7 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC11.94□□□□□ -0.5
SVIPQ8NHG7 PCSK1-202ENST00000508626 2234 ntTSL 2 BASIC11.94□□□□□ -0.5
SVIPQ8NHG7 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SVIPQ8NHG7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
SVIPQ8NHG7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
SVIPQ8NHG7 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC11.94□□□□□ -0.5
SVIPQ8NHG7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SVIPQ8NHG7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC11.94□□□□□ -0.5
SVIPQ8NHG7 IL36RN-202ENST00000393200 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SVIPQ8NHG7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SVIPQ8NHG7 CCDC57-205ENST00000392346 2964 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
SVIPQ8NHG7 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC11.94□□□□□ -0.5
SVIPQ8NHG7 MEIS2-206ENST00000424352 2917 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
SVIPQ8NHG7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SVIPQ8NHG7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
SVIPQ8NHG7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SVIPQ8NHG7 AC009159.4-201ENST00000624606 2031 ntBASIC11.94□□□□□ -0.5
SVIPQ8NHG7 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC11.94□□□□□ -0.5
SVIPQ8NHG7 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SVIPQ8NHG7 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC11.94□□□□□ -0.5
SVIPQ8NHG7 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC11.94□□□□□ -0.5
SVIPQ8NHG7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SVIPQ8NHG7 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
SVIPQ8NHG7 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
SVIPQ8NHG7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SVIPQ8NHG7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SVIPQ8NHG7 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC11.93□□□□□ -0.5
SVIPQ8NHG7 DDX27-206ENST00000618172 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SVIPQ8NHG7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC11.93□□□□□ -0.5
SVIPQ8NHG7 LINC00668-204ENST00000580197 2343 ntTSL 2 BASIC11.93□□□□□ -0.5
SVIPQ8NHG7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
SVIPQ8NHG7 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SVIPQ8NHG7 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SVIPQ8NHG7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC11.93□□□□□ -0.5
SVIPQ8NHG7 TFIP11-203ENST00000407431 2974 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
SVIPQ8NHG7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SVIPQ8NHG7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
SVIPQ8NHG7 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC11.93□□□□□ -0.5
SVIPQ8NHG7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
SVIPQ8NHG7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SVIPQ8NHG7 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC11.93□□□□□ -0.5
SVIPQ8NHG7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SVIPQ8NHG7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC11.93□□□□□ -0.5
SVIPQ8NHG7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SVIPQ8NHG7 POR-209ENST00000439269 1858 ntTSL 2 BASIC11.93□□□□□ -0.5
SVIPQ8NHG7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SVIPQ8NHG7 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
SVIPQ8NHG7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SVIPQ8NHG7 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SVIPQ8NHG7 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SVIPQ8NHG7 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SVIPQ8NHG7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC11.93□□□□□ -0.5
SVIPQ8NHG7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SVIPQ8NHG7 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SVIPQ8NHG7 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SVIPQ8NHG7 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms