Protein–RNA interactions for Protein: Q8N1L1

LINC00528, Putative uncharacterized protein encoded by LINC00528, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00528Q8N1L1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00528Q8N1L1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00528Q8N1L1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00528Q8N1L1 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC00528Q8N1L1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00528Q8N1L1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00528Q8N1L1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00528Q8N1L1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00528Q8N1L1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC00528Q8N1L1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00528Q8N1L1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00528Q8N1L1 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
LINC00528Q8N1L1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00528Q8N1L1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
LINC00528Q8N1L1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00528Q8N1L1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00528Q8N1L1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00528Q8N1L1 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00528Q8N1L1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC12.56□□□□□ -0.4
LINC00528Q8N1L1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC00528Q8N1L1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00528Q8N1L1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00528Q8N1L1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 MMP23A-201ENST00000234610 1017 ntBASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 FAM197Y1-201ENST00000421178 764 ntBASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 MTATP6P17-201ENST00000431030 672 ntBASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 AC118282.1-201ENST00000506408 765 ntBASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 AC021546.1-201ENST00000518927 1031 ntTSL 3 BASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 AP001830.1-201ENST00000528717 692 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 AC012306.2-201ENST00000609350 630 ntBASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 AL353708.3-201ENST00000610272 989 ntBASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 AC004777.1-201ENST00000624317 287 ntBASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 AC090506.2-201ENST00000624521 419 ntBASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00528Q8N1L1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 CRYGB-201ENST00000260988 641 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 AC023632.3-201ENST00000521633 145 ntBASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 LINC02349-201ENST00000561386 963 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 RN7SL850P-201ENST00000579959 291 ntBASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 AC005520.3-201ENST00000602874 370 ntBASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 AL022328.3-201ENST00000607943 679 ntBASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 AC004264.1-201ENST00000608354 794 ntBASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 AC020763.2-201ENST00000623155 1255 ntBASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 SUGT1P3-205ENST00000633814 572 ntTSL 3 BASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00528Q8N1L1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms