Protein–RNA interactions for Protein: Q8IZU3

SYCP3, Synaptonemal complex protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3Q8IZU3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SYCP3Q8IZU3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.96■□□□□ 0.95
SYCP3Q8IZU3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYCP3Q8IZU3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SYCP3Q8IZU3 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.96■□□□□ 0.95
SYCP3Q8IZU3 FEM1AP3-201ENST00000403722 1741 ntBASIC20.96■□□□□ 0.95
SYCP3Q8IZU3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYCP3Q8IZU3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SYCP3Q8IZU3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.96■□□□□ 0.95
SYCP3Q8IZU3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
SYCP3Q8IZU3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.96■□□□□ 0.95
SYCP3Q8IZU3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.96■□□□□ 0.95
SYCP3Q8IZU3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYCP3Q8IZU3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.96■□□□□ 0.95
SYCP3Q8IZU3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.96■□□□□ 0.95
SYCP3Q8IZU3 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.96■□□□□ 0.95
SYCP3Q8IZU3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYCP3Q8IZU3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SYCP3Q8IZU3 KRT17P2-201ENST00000300992 1314 ntBASIC20.96■□□□□ 0.95
SYCP3Q8IZU3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SYCP3Q8IZU3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYCP3Q8IZU3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.96■□□□□ 0.95
SYCP3Q8IZU3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SYCP3Q8IZU3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.95■□□□□ 0.94
SYCP3Q8IZU3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYCP3Q8IZU3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYCP3Q8IZU3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SYCP3Q8IZU3 AC020763.4-201ENST00000623414 4170 ntBASIC20.95■□□□□ 0.94
SYCP3Q8IZU3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.95■□□□□ 0.94
SYCP3Q8IZU3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SYCP3Q8IZU3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYCP3Q8IZU3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYCP3Q8IZU3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SYCP3Q8IZU3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SYCP3Q8IZU3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.95■□□□□ 0.94
SYCP3Q8IZU3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.95■□□□□ 0.94
SYCP3Q8IZU3 MIR4497-201ENST00000583208 89 ntBASIC20.95■□□□□ 0.94
SYCP3Q8IZU3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SYCP3Q8IZU3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYCP3Q8IZU3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYCP3Q8IZU3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYCP3Q8IZU3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
SYCP3Q8IZU3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYCP3Q8IZU3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SYCP3Q8IZU3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYCP3Q8IZU3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYCP3Q8IZU3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYCP3Q8IZU3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYCP3Q8IZU3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYCP3Q8IZU3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYCP3Q8IZU3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 AL049812.1-201ENST00000432563 2267 ntBASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 PRSS44-201ENST00000515154 1146 ntBASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 SLC25A1P4-201ENST00000567977 778 ntBASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 AP000692.2-201ENST00000608391 879 ntBASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYCP3Q8IZU3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SYCP3Q8IZU3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYCP3Q8IZU3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYCP3Q8IZU3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYCP3Q8IZU3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.93■□□□□ 0.94
SYCP3Q8IZU3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYCP3Q8IZU3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYCP3Q8IZU3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYCP3Q8IZU3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.93■□□□□ 0.94
SYCP3Q8IZU3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
SYCP3Q8IZU3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
SYCP3Q8IZU3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.93■□□□□ 0.94
SYCP3Q8IZU3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.93■□□□□ 0.94
SYCP3Q8IZU3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms