Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCUBE3Q8IX30 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.99■□□□□ 0.79
SCUBE3Q8IX30 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCUBE3Q8IX30 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.99■□□□□ 0.79
SCUBE3Q8IX30 KRT18P21-201ENST00000515767 1272 ntBASIC19.99■□□□□ 0.79
SCUBE3Q8IX30 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SCUBE3Q8IX30 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SCUBE3Q8IX30 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.99■□□□□ 0.79
SCUBE3Q8IX30 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCUBE3Q8IX30 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCUBE3Q8IX30 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCUBE3Q8IX30 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SCUBE3Q8IX30 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCUBE3Q8IX30 AP000974.1-201ENST00000623909 2387 ntBASIC19.99■□□□□ 0.79
SCUBE3Q8IX30 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SCUBE3Q8IX30 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.99■□□□□ 0.79
SCUBE3Q8IX30 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCUBE3Q8IX30 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCUBE3Q8IX30 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
SCUBE3Q8IX30 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCUBE3Q8IX30 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.98■□□□□ 0.79
SCUBE3Q8IX30 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCUBE3Q8IX30 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SCUBE3Q8IX30 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCUBE3Q8IX30 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.98■□□□□ 0.79
SCUBE3Q8IX30 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SCUBE3Q8IX30 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SCUBE3Q8IX30 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.98■□□□□ 0.79
SCUBE3Q8IX30 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.98■□□□□ 0.79
SCUBE3Q8IX30 BX088651.1-201ENST00000540551 451 ntBASIC19.98■□□□□ 0.79
SCUBE3Q8IX30 AP005242.2-201ENST00000580065 1175 ntBASIC19.98■□□□□ 0.79
SCUBE3Q8IX30 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.98■□□□□ 0.79
SCUBE3Q8IX30 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SCUBE3Q8IX30 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SCUBE3Q8IX30 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCUBE3Q8IX30 KRT8P9-201ENST00000558927 1449 ntBASIC19.98■□□□□ 0.79
SCUBE3Q8IX30 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCUBE3Q8IX30 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SCUBE3Q8IX30 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
SCUBE3Q8IX30 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SCUBE3Q8IX30 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCUBE3Q8IX30 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SCUBE3Q8IX30 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.97■□□□□ 0.79
SCUBE3Q8IX30 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.97■□□□□ 0.79
SCUBE3Q8IX30 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCUBE3Q8IX30 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCUBE3Q8IX30 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCUBE3Q8IX30 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.97■□□□□ 0.79
SCUBE3Q8IX30 MMP23A-201ENST00000234610 1017 ntBASIC19.97■□□□□ 0.79
SCUBE3Q8IX30 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.97■□□□□ 0.79
SCUBE3Q8IX30 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.97■□□□□ 0.79
SCUBE3Q8IX30 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCUBE3Q8IX30 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.97■□□□□ 0.79
SCUBE3Q8IX30 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
SCUBE3Q8IX30 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.97■□□□□ 0.79
SCUBE3Q8IX30 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCUBE3Q8IX30 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCUBE3Q8IX30 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCUBE3Q8IX30 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.96■□□□□ 0.79
SCUBE3Q8IX30 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.96■□□□□ 0.79
SCUBE3Q8IX30 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCUBE3Q8IX30 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
SCUBE3Q8IX30 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCUBE3Q8IX30 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCUBE3Q8IX30 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SCUBE3Q8IX30 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCUBE3Q8IX30 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.96■□□□□ 0.79
SCUBE3Q8IX30 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.96■□□□□ 0.79
SCUBE3Q8IX30 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.96■□□□□ 0.79
SCUBE3Q8IX30 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
SCUBE3Q8IX30 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCUBE3Q8IX30 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SCUBE3Q8IX30 CYP2D8P-201ENST00000433633 1490 ntBASIC19.96■□□□□ 0.79
SCUBE3Q8IX30 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
SCUBE3Q8IX30 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCUBE3Q8IX30 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCUBE3Q8IX30 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCUBE3Q8IX30 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.96■□□□□ 0.79
SCUBE3Q8IX30 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
SCUBE3Q8IX30 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SCUBE3Q8IX30 AC098818.2-201ENST00000564925 2320 ntBASIC19.96■□□□□ 0.79
SCUBE3Q8IX30 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCUBE3Q8IX30 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
SCUBE3Q8IX30 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SCUBE3Q8IX30 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SCUBE3Q8IX30 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCUBE3Q8IX30 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCUBE3Q8IX30 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SCUBE3Q8IX30 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SCUBE3Q8IX30 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SCUBE3Q8IX30 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.95■□□□□ 0.78
SCUBE3Q8IX30 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.95■□□□□ 0.78
SCUBE3Q8IX30 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCUBE3Q8IX30 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
SCUBE3Q8IX30 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
SCUBE3Q8IX30 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCUBE3Q8IX30 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.95■□□□□ 0.78
SCUBE3Q8IX30 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCUBE3Q8IX30 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.94■□□□□ 0.78
SCUBE3Q8IX30 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms