Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC23.49■■□□□ 1.35
CHD1LQ86WJ1 KSR1P1-201ENST00000446298 240 ntBASIC23.49■■□□□ 1.35
CHD1LQ86WJ1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC23.49■■□□□ 1.35
CHD1LQ86WJ1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
CHD1LQ86WJ1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CHD1LQ86WJ1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHD1LQ86WJ1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHD1LQ86WJ1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHD1LQ86WJ1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHD1LQ86WJ1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC23.48■■□□□ 1.35
CHD1LQ86WJ1 ANO7L1-203ENST00000602586 1720 ntBASIC23.48■■□□□ 1.35
CHD1LQ86WJ1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
CHD1LQ86WJ1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHD1LQ86WJ1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHD1LQ86WJ1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC23.48■■□□□ 1.35
CHD1LQ86WJ1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHD1LQ86WJ1 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHD1LQ86WJ1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHD1LQ86WJ1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
CHD1LQ86WJ1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC23.48■■□□□ 1.35
CHD1LQ86WJ1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC23.48■■□□□ 1.35
CHD1LQ86WJ1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHD1LQ86WJ1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHD1LQ86WJ1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHD1LQ86WJ1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
CHD1LQ86WJ1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHD1LQ86WJ1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHD1LQ86WJ1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHD1LQ86WJ1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHD1LQ86WJ1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC23.47■■□□□ 1.35
CHD1LQ86WJ1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHD1LQ86WJ1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CHD1LQ86WJ1 AC091390.4-202ENST00000476426 537 ntBASIC23.47■■□□□ 1.35
CHD1LQ86WJ1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC23.47■■□□□ 1.35
CHD1LQ86WJ1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC23.47■■□□□ 1.35
CHD1LQ86WJ1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CHD1LQ86WJ1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHD1LQ86WJ1 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHD1LQ86WJ1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
CHD1LQ86WJ1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC23.47■■□□□ 1.35
CHD1LQ86WJ1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC23.47■■□□□ 1.35
CHD1LQ86WJ1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CHD1LQ86WJ1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CHD1LQ86WJ1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CHD1LQ86WJ1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CHD1LQ86WJ1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CHD1LQ86WJ1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CHD1LQ86WJ1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CHD1LQ86WJ1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
CHD1LQ86WJ1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC23.46■■□□□ 1.35
CHD1LQ86WJ1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC23.46■■□□□ 1.35
CHD1LQ86WJ1 AC005082.1-201ENST00000413042 2259 ntBASIC23.46■■□□□ 1.35
CHD1LQ86WJ1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC23.46■■□□□ 1.35
CHD1LQ86WJ1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC23.46■■□□□ 1.35
CHD1LQ86WJ1 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC23.46■■□□□ 1.35
CHD1LQ86WJ1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC23.46■■□□□ 1.35
CHD1LQ86WJ1 RCC2P6-201ENST00000526625 1557 ntBASIC23.46■■□□□ 1.35
CHD1LQ86WJ1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC23.46■■□□□ 1.35
CHD1LQ86WJ1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CHD1LQ86WJ1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC23.46■■□□□ 1.35
CHD1LQ86WJ1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC23.46■■□□□ 1.35
CHD1LQ86WJ1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC23.46■■□□□ 1.35
CHD1LQ86WJ1 AL359736.2-201ENST00000621992 437 ntBASIC23.46■■□□□ 1.35
CHD1LQ86WJ1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC23.46■■□□□ 1.35
CHD1LQ86WJ1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
CHD1LQ86WJ1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CHD1LQ86WJ1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
CHD1LQ86WJ1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
CHD1LQ86WJ1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
CHD1LQ86WJ1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
CHD1LQ86WJ1 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CHD1LQ86WJ1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
CHD1LQ86WJ1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC23.45■■□□□ 1.34
CHD1LQ86WJ1 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CHD1LQ86WJ1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
CHD1LQ86WJ1 AF186192.3-201ENST00000583427 947 ntBASIC23.45■■□□□ 1.34
CHD1LQ86WJ1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC23.45■■□□□ 1.34
CHD1LQ86WJ1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
CHD1LQ86WJ1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CHD1LQ86WJ1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
CHD1LQ86WJ1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC23.45■■□□□ 1.34
CHD1LQ86WJ1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
CHD1LQ86WJ1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC23.45■■□□□ 1.34
CHD1LQ86WJ1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CHD1LQ86WJ1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CHD1LQ86WJ1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC23.44■■□□□ 1.34
CHD1LQ86WJ1 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CHD1LQ86WJ1 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CHD1LQ86WJ1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CHD1LQ86WJ1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CHD1LQ86WJ1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC23.44■■□□□ 1.34
CHD1LQ86WJ1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CHD1LQ86WJ1 KRT16P1-201ENST00000399124 1418 ntBASIC23.44■■□□□ 1.34
CHD1LQ86WJ1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
CHD1LQ86WJ1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
CHD1LQ86WJ1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC23.44■■□□□ 1.34
CHD1LQ86WJ1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
CHD1LQ86WJ1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC23.44■■□□□ 1.34
CHD1LQ86WJ1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CHD1LQ86WJ1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms