Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRRTM4Q86VH4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.65■□□□□ 0.58
LRRTM4Q86VH4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LRRTM4Q86VH4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRTM4Q86VH4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
LRRTM4Q86VH4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRRTM4Q86VH4 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
LRRTM4Q86VH4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
LRRTM4Q86VH4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
LRRTM4Q86VH4 FP475955.4-201ENST00000623131 1990 ntBASIC18.64■□□□□ 0.58
LRRTM4Q86VH4 AC005332.7-201ENST00000614046 2005 ntBASIC18.64■□□□□ 0.58
LRRTM4Q86VH4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.64■□□□□ 0.57
LRRTM4Q86VH4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRTM4Q86VH4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRTM4Q86VH4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRTM4Q86VH4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRTM4Q86VH4 LIN28AP1-201ENST00000429574 405 ntBASIC18.64■□□□□ 0.57
LRRTM4Q86VH4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.64■□□□□ 0.57
LRRTM4Q86VH4 AL137013.1-201ENST00000432946 1228 ntBASIC18.64■□□□□ 0.57
LRRTM4Q86VH4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRTM4Q86VH4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.64■□□□□ 0.57
LRRTM4Q86VH4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRTM4Q86VH4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.64■□□□□ 0.57
LRRTM4Q86VH4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRTM4Q86VH4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRTM4Q86VH4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRTM4Q86VH4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRTM4Q86VH4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRTM4Q86VH4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRTM4Q86VH4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRTM4Q86VH4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRTM4Q86VH4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRTM4Q86VH4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
LRRTM4Q86VH4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRTM4Q86VH4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 AC116562.4-201ENST00000641316 2276 ntBASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 AC005521.1-201ENST00000393351 872 ntBASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 KRT8P3-201ENST00000519669 1449 ntBASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
LRRTM4Q86VH4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRTM4Q86VH4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRTM4Q86VH4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRTM4Q86VH4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LRRTM4Q86VH4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRTM4Q86VH4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRTM4Q86VH4 TERF1P1-201ENST00000311003 1181 ntBASIC18.62■□□□□ 0.57
LRRTM4Q86VH4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRTM4Q86VH4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LRRTM4Q86VH4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
LRRTM4Q86VH4 RCN1P1-201ENST00000400413 996 ntBASIC18.62■□□□□ 0.57
LRRTM4Q86VH4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRTM4Q86VH4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRTM4Q86VH4 FAM210CP-201ENST00000445714 574 ntBASIC18.62■□□□□ 0.57
LRRTM4Q86VH4 ATP5G1P1-201ENST00000448724 379 ntBASIC18.62■□□□□ 0.57
LRRTM4Q86VH4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRTM4Q86VH4 KRT18P21-201ENST00000515767 1272 ntBASIC18.62■□□□□ 0.57
LRRTM4Q86VH4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
LRRTM4Q86VH4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LRRTM4Q86VH4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
LRRTM4Q86VH4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRTM4Q86VH4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRTM4Q86VH4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LRRTM4Q86VH4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LRRTM4Q86VH4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRTM4Q86VH4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.62■□□□□ 0.57
LRRTM4Q86VH4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRTM4Q86VH4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRTM4Q86VH4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRTM4Q86VH4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.61■□□□□ 0.57
LRRTM4Q86VH4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRTM4Q86VH4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms