Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
LDB1Q86U70 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LDB1Q86U70 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LDB1Q86U70 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.97■□□□□ 0.63
LDB1Q86U70 RCC2P6-201ENST00000526625 1557 ntBASIC18.97■□□□□ 0.63
LDB1Q86U70 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LDB1Q86U70 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
LDB1Q86U70 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LDB1Q86U70 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
LDB1Q86U70 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.97■□□□□ 0.63
LDB1Q86U70 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LDB1Q86U70 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LDB1Q86U70 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LDB1Q86U70 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.96■□□□□ 0.63
LDB1Q86U70 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LDB1Q86U70 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
LDB1Q86U70 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LDB1Q86U70 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LDB1Q86U70 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LDB1Q86U70 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
LDB1Q86U70 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LDB1Q86U70 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
LDB1Q86U70 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.96■□□□□ 0.63
LDB1Q86U70 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
LDB1Q86U70 AC091390.4-202ENST00000476426 537 ntBASIC18.96■□□□□ 0.63
LDB1Q86U70 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LDB1Q86U70 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.96■□□□□ 0.63
LDB1Q86U70 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
LDB1Q86U70 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LDB1Q86U70 AC073195.1-201ENST00000607241 877 ntBASIC18.96■□□□□ 0.63
LDB1Q86U70 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LDB1Q86U70 KRT8P11-201ENST00000409686 1436 ntBASIC18.96■□□□□ 0.63
LDB1Q86U70 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LDB1Q86U70 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LDB1Q86U70 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.96■□□□□ 0.63
LDB1Q86U70 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
LDB1Q86U70 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LDB1Q86U70 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LDB1Q86U70 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LDB1Q86U70 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.95■□□□□ 0.62
LDB1Q86U70 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LDB1Q86U70 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LDB1Q86U70 AC011506.1-201ENST00000474329 610 ntBASIC18.95■□□□□ 0.62
LDB1Q86U70 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LDB1Q86U70 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.95■□□□□ 0.62
LDB1Q86U70 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LDB1Q86U70 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LDB1Q86U70 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LDB1Q86U70 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LDB1Q86U70 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LDB1Q86U70 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LDB1Q86U70 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LDB1Q86U70 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LDB1Q86U70 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LDB1Q86U70 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LDB1Q86U70 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
LDB1Q86U70 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LDB1Q86U70 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.94■□□□□ 0.62
LDB1Q86U70 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
LDB1Q86U70 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.94■□□□□ 0.62
LDB1Q86U70 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LDB1Q86U70 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LDB1Q86U70 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LDB1Q86U70 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.94■□□□□ 0.62
LDB1Q86U70 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
LDB1Q86U70 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.94■□□□□ 0.62
LDB1Q86U70 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LDB1Q86U70 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.94■□□□□ 0.62
LDB1Q86U70 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.94■□□□□ 0.62
LDB1Q86U70 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LDB1Q86U70 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.94■□□□□ 0.62
LDB1Q86U70 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.94■□□□□ 0.62
LDB1Q86U70 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LDB1Q86U70 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LDB1Q86U70 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LDB1Q86U70 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LDB1Q86U70 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LDB1Q86U70 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LDB1Q86U70 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LDB1Q86U70 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
LDB1Q86U70 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
LDB1Q86U70 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
LDB1Q86U70 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LDB1Q86U70 UBE2SP1-201ENST00000450587 669 ntBASIC18.93■□□□□ 0.62
LDB1Q86U70 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LDB1Q86U70 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.93■□□□□ 0.62
LDB1Q86U70 AC011298.2-201ENST00000617989 482 ntBASIC18.93■□□□□ 0.62
LDB1Q86U70 AL031985.4-201ENST00000642138 673 ntBASIC18.93■□□□□ 0.62
LDB1Q86U70 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LDB1Q86U70 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
LDB1Q86U70 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LDB1Q86U70 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.93■□□□□ 0.62
LDB1Q86U70 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
LDB1Q86U70 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
LDB1Q86U70 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LDB1Q86U70 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.93■□□□□ 0.62
LDB1Q86U70 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LDB1Q86U70 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
LDB1Q86U70 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LDB1Q86U70 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms