Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.1■□□□□ 0.65
LYSMD3Q7Z3D4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.1■□□□□ 0.65
LYSMD3Q7Z3D4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.1■□□□□ 0.65
LYSMD3Q7Z3D4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LYSMD3Q7Z3D4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.1■□□□□ 0.65
LYSMD3Q7Z3D4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
LYSMD3Q7Z3D4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.1■□□□□ 0.65
LYSMD3Q7Z3D4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LYSMD3Q7Z3D4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LYSMD3Q7Z3D4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
LYSMD3Q7Z3D4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.1■□□□□ 0.65
LYSMD3Q7Z3D4 AL390955.1-201ENST00000428694 934 ntBASIC19.1■□□□□ 0.65
LYSMD3Q7Z3D4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.1■□□□□ 0.65
LYSMD3Q7Z3D4 CKBP1-201ENST00000565489 1086 ntBASIC19.1■□□□□ 0.65
LYSMD3Q7Z3D4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.1■□□□□ 0.65
LYSMD3Q7Z3D4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LYSMD3Q7Z3D4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
LYSMD3Q7Z3D4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LYSMD3Q7Z3D4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LYSMD3Q7Z3D4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.1■□□□□ 0.65
LYSMD3Q7Z3D4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LYSMD3Q7Z3D4 AL161938.1-201ENST00000569833 2180 ntBASIC19.09■□□□□ 0.65
LYSMD3Q7Z3D4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
LYSMD3Q7Z3D4 AC096733.2-201ENST00000609937 1394 ntBASIC19.09■□□□□ 0.65
LYSMD3Q7Z3D4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
LYSMD3Q7Z3D4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LYSMD3Q7Z3D4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
LYSMD3Q7Z3D4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
LYSMD3Q7Z3D4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LYSMD3Q7Z3D4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.09■□□□□ 0.65
LYSMD3Q7Z3D4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.09■□□□□ 0.65
LYSMD3Q7Z3D4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LYSMD3Q7Z3D4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LYSMD3Q7Z3D4 CRYGFP-201ENST00000418459 633 ntBASIC19.09■□□□□ 0.65
LYSMD3Q7Z3D4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LYSMD3Q7Z3D4 MFAP1P1-201ENST00000442257 1255 ntBASIC19.09■□□□□ 0.65
LYSMD3Q7Z3D4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LYSMD3Q7Z3D4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LYSMD3Q7Z3D4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.09■□□□□ 0.65
LYSMD3Q7Z3D4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LYSMD3Q7Z3D4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LYSMD3Q7Z3D4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LYSMD3Q7Z3D4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LYSMD3Q7Z3D4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LYSMD3Q7Z3D4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.09■□□□□ 0.65
LYSMD3Q7Z3D4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LYSMD3Q7Z3D4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LYSMD3Q7Z3D4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LYSMD3Q7Z3D4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
LYSMD3Q7Z3D4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LYSMD3Q7Z3D4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LYSMD3Q7Z3D4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LYSMD3Q7Z3D4 AL049812.1-201ENST00000432563 2267 ntBASIC19.08■□□□□ 0.65
LYSMD3Q7Z3D4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LYSMD3Q7Z3D4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
LYSMD3Q7Z3D4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.65
LYSMD3Q7Z3D4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
LYSMD3Q7Z3D4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
LYSMD3Q7Z3D4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
LYSMD3Q7Z3D4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.65
LYSMD3Q7Z3D4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LYSMD3Q7Z3D4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.08■□□□□ 0.64
LYSMD3Q7Z3D4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LYSMD3Q7Z3D4 MIR1238-201ENST00000408483 83 ntBASIC19.08■□□□□ 0.64
LYSMD3Q7Z3D4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
LYSMD3Q7Z3D4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LYSMD3Q7Z3D4 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.08■□□□□ 0.64
LYSMD3Q7Z3D4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.08■□□□□ 0.64
LYSMD3Q7Z3D4 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.08■□□□□ 0.64
LYSMD3Q7Z3D4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.08■□□□□ 0.64
LYSMD3Q7Z3D4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.08■□□□□ 0.64
LYSMD3Q7Z3D4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LYSMD3Q7Z3D4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
LYSMD3Q7Z3D4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LYSMD3Q7Z3D4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LYSMD3Q7Z3D4 FP475955.4-201ENST00000623131 1990 ntBASIC19.08■□□□□ 0.64
LYSMD3Q7Z3D4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
LYSMD3Q7Z3D4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
LYSMD3Q7Z3D4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LYSMD3Q7Z3D4 LETM1P2-201ENST00000597330 2178 ntBASIC19.08■□□□□ 0.64
LYSMD3Q7Z3D4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LYSMD3Q7Z3D4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LYSMD3Q7Z3D4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LYSMD3Q7Z3D4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
LYSMD3Q7Z3D4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LYSMD3Q7Z3D4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LYSMD3Q7Z3D4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LYSMD3Q7Z3D4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
LYSMD3Q7Z3D4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.07■□□□□ 0.64
LYSMD3Q7Z3D4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.07■□□□□ 0.64
LYSMD3Q7Z3D4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.07■□□□□ 0.64
LYSMD3Q7Z3D4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.07■□□□□ 0.64
LYSMD3Q7Z3D4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LYSMD3Q7Z3D4 FEM1AP3-201ENST00000403722 1741 ntBASIC19.07■□□□□ 0.64
LYSMD3Q7Z3D4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LYSMD3Q7Z3D4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.07■□□□□ 0.64
LYSMD3Q7Z3D4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
LYSMD3Q7Z3D4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
LYSMD3Q7Z3D4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LYSMD3Q7Z3D4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms