Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
LRFN4Q6PJG9 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRFN4Q6PJG9 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.1■□□□□ 0.33
LRFN4Q6PJG9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.1■□□□□ 0.33
LRFN4Q6PJG9 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRFN4Q6PJG9 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRFN4Q6PJG9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.1■□□□□ 0.33
LRFN4Q6PJG9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LRFN4Q6PJG9 LINC01465-201ENST00000408887 1940 ntBASIC17.1■□□□□ 0.33
LRFN4Q6PJG9 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRFN4Q6PJG9 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.1■□□□□ 0.33
LRFN4Q6PJG9 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRFN4Q6PJG9 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LRFN4Q6PJG9 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRFN4Q6PJG9 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.1■□□□□ 0.33
LRFN4Q6PJG9 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.1■□□□□ 0.33
LRFN4Q6PJG9 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LRFN4Q6PJG9 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.1■□□□□ 0.33
LRFN4Q6PJG9 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.1■□□□□ 0.33
LRFN4Q6PJG9 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRFN4Q6PJG9 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRFN4Q6PJG9 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRFN4Q6PJG9 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRFN4Q6PJG9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRFN4Q6PJG9 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRFN4Q6PJG9 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.1■□□□□ 0.33
LRFN4Q6PJG9 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.09■□□□□ 0.33
LRFN4Q6PJG9 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRFN4Q6PJG9 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRFN4Q6PJG9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRFN4Q6PJG9 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRFN4Q6PJG9 PRORSD1P-201ENST00000295112 541 ntBASIC17.09■□□□□ 0.33
LRFN4Q6PJG9 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
LRFN4Q6PJG9 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRFN4Q6PJG9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRFN4Q6PJG9 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRFN4Q6PJG9 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.09■□□□□ 0.33
LRFN4Q6PJG9 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.09■□□□□ 0.33
LRFN4Q6PJG9 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRFN4Q6PJG9 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.09■□□□□ 0.33
LRFN4Q6PJG9 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.09■□□□□ 0.33
LRFN4Q6PJG9 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.09■□□□□ 0.33
LRFN4Q6PJG9 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.09■□□□□ 0.33
LRFN4Q6PJG9 HLA-A-209ENST00000638375 975 ntBASIC17.09■□□□□ 0.33
LRFN4Q6PJG9 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LRFN4Q6PJG9 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.09■□□□□ 0.33
LRFN4Q6PJG9 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.09■□□□□ 0.33
LRFN4Q6PJG9 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRFN4Q6PJG9 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRFN4Q6PJG9 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRFN4Q6PJG9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRFN4Q6PJG9 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRFN4Q6PJG9 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRFN4Q6PJG9 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRFN4Q6PJG9 FZD10-202ENST00000539839 3282 ntBASIC17.09■□□□□ 0.33
LRFN4Q6PJG9 HTR7P1-202ENST00000624664 4411 ntBASIC17.09■□□□□ 0.33
LRFN4Q6PJG9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRFN4Q6PJG9 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
LRFN4Q6PJG9 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LRFN4Q6PJG9 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRFN4Q6PJG9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LRFN4Q6PJG9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.08■□□□□ 0.33
LRFN4Q6PJG9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.08■□□□□ 0.33
LRFN4Q6PJG9 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.08■□□□□ 0.33
LRFN4Q6PJG9 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRFN4Q6PJG9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LRFN4Q6PJG9 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.08■□□□□ 0.33
LRFN4Q6PJG9 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRFN4Q6PJG9 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.08■□□□□ 0.33
LRFN4Q6PJG9 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LRFN4Q6PJG9 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
LRFN4Q6PJG9 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRFN4Q6PJG9 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.08■□□□□ 0.32
LRFN4Q6PJG9 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRFN4Q6PJG9 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.08■□□□□ 0.32
LRFN4Q6PJG9 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRFN4Q6PJG9 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.08■□□□□ 0.32
LRFN4Q6PJG9 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRFN4Q6PJG9 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRFN4Q6PJG9 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRFN4Q6PJG9 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
LRFN4Q6PJG9 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.08■□□□□ 0.32
LRFN4Q6PJG9 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.08■□□□□ 0.32
LRFN4Q6PJG9 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
LRFN4Q6PJG9 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.08■□□□□ 0.32
LRFN4Q6PJG9 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRFN4Q6PJG9 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.08■□□□□ 0.32
LRFN4Q6PJG9 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRFN4Q6PJG9 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.08■□□□□ 0.32
LRFN4Q6PJG9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.08■□□□□ 0.32
LRFN4Q6PJG9 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRFN4Q6PJG9 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRFN4Q6PJG9 TEX21P-204ENST00000641479 1693 ntBASIC17.07■□□□□ 0.32
LRFN4Q6PJG9 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.07■□□□□ 0.32
LRFN4Q6PJG9 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRFN4Q6PJG9 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.07■□□□□ 0.32
LRFN4Q6PJG9 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LRFN4Q6PJG9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRFN4Q6PJG9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms