Protein–RNA interactions for Protein: Q6NT52

CGB2, Choriogonadotropin subunit beta variant 2, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB2Q6NT52 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CGB2Q6NT52 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CGB2Q6NT52 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.63■□□□□ 0.57
CGB2Q6NT52 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CGB2Q6NT52 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CGB2Q6NT52 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CGB2Q6NT52 SIRPAP1-201ENST00000448467 1770 ntBASIC18.63■□□□□ 0.57
CGB2Q6NT52 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CGB2Q6NT52 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CGB2Q6NT52 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.62■□□□□ 0.57
CGB2Q6NT52 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CGB2Q6NT52 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CGB2Q6NT52 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.62■□□□□ 0.57
CGB2Q6NT52 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CGB2Q6NT52 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.62■□□□□ 0.57
CGB2Q6NT52 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CGB2Q6NT52 BID-214ENST00000617586 542 ntTSL 5 BASIC18.62■□□□□ 0.57
CGB2Q6NT52 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CGB2Q6NT52 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CGB2Q6NT52 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.62■□□□□ 0.57
CGB2Q6NT52 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CGB2Q6NT52 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CGB2Q6NT52 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CGB2Q6NT52 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CGB2Q6NT52 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CGB2Q6NT52 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CGB2Q6NT52 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CGB2Q6NT52 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CGB2Q6NT52 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CGB2Q6NT52 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CGB2Q6NT52 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CGB2Q6NT52 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CGB2Q6NT52 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CGB2Q6NT52 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CGB2Q6NT52 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CGB2Q6NT52 AC012317.2-201ENST00000623305 2251 ntBASIC18.61■□□□□ 0.57
CGB2Q6NT52 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CGB2Q6NT52 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CGB2Q6NT52 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CGB2Q6NT52 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CGB2Q6NT52 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CGB2Q6NT52 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CGB2Q6NT52 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.61■□□□□ 0.57
CGB2Q6NT52 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CGB2Q6NT52 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CGB2Q6NT52 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.61■□□□□ 0.57
CGB2Q6NT52 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CGB2Q6NT52 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.61■□□□□ 0.57
CGB2Q6NT52 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CGB2Q6NT52 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.61■□□□□ 0.57
CGB2Q6NT52 GPX1P1-201ENST00000388829 606 ntBASIC18.61■□□□□ 0.57
CGB2Q6NT52 CYP2T1P-201ENST00000432607 1285 ntBASIC18.61■□□□□ 0.57
CGB2Q6NT52 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.61■□□□□ 0.57
CGB2Q6NT52 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.61■□□□□ 0.57
CGB2Q6NT52 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CGB2Q6NT52 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.61■□□□□ 0.57
CGB2Q6NT52 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CGB2Q6NT52 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CGB2Q6NT52 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CGB2Q6NT52 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CGB2Q6NT52 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CGB2Q6NT52 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGB2Q6NT52 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CGB2Q6NT52 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
CGB2Q6NT52 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGB2Q6NT52 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGB2Q6NT52 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGB2Q6NT52 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.6■□□□□ 0.57
CGB2Q6NT52 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CGB2Q6NT52 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.6■□□□□ 0.57
CGB2Q6NT52 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGB2Q6NT52 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CGB2Q6NT52 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CGB2Q6NT52 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CGB2Q6NT52 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CGB2Q6NT52 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGB2Q6NT52 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGB2Q6NT52 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CGB2Q6NT52 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGB2Q6NT52 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGB2Q6NT52 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CGB2Q6NT52 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGB2Q6NT52 AL139246.5-201ENST00000606645 996 ntBASIC18.6■□□□□ 0.57
CGB2Q6NT52 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
CGB2Q6NT52 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGB2Q6NT52 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGB2Q6NT52 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.6■□□□□ 0.57
CGB2Q6NT52 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CGB2Q6NT52 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGB2Q6NT52 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGB2Q6NT52 AC124283.5-201ENST00000624661 1809 ntBASIC18.6■□□□□ 0.57
CGB2Q6NT52 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGB2Q6NT52 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGB2Q6NT52 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.6■□□□□ 0.57
CGB2Q6NT52 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.6■□□□□ 0.57
CGB2Q6NT52 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CGB2Q6NT52 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.6■□□□□ 0.57
CGB2Q6NT52 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGB2Q6NT52 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CGB2Q6NT52 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms