Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 MTDHP1-201ENST00000605323 784 ntBASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 AC006058.3-201ENST00000606217 1069 ntBASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 AL133373.2-201ENST00000623187 2828 ntBASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF1Q5TC12 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 TSPY20P-201ENST00000450910 630 ntBASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 PRKY-204ENST00000533551 1019 ntBASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 ITM2C-210ENST00000620962 501 ntBASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATPAF1Q5TC12 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATPAF1Q5TC12 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.46■□□□□ 0.23
ATPAF1Q5TC12 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATPAF1Q5TC12 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATPAF1Q5TC12 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATPAF1Q5TC12 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATPAF1Q5TC12 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATPAF1Q5TC12 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATPAF1Q5TC12 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
ATPAF1Q5TC12 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATPAF1Q5TC12 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATPAF1Q5TC12 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATPAF1Q5TC12 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.46■□□□□ 0.23
ATPAF1Q5TC12 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATPAF1Q5TC12 AC128676.1-201ENST00000454392 318 ntBASIC16.46■□□□□ 0.23
ATPAF1Q5TC12 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATPAF1Q5TC12 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.46■□□□□ 0.23
ATPAF1Q5TC12 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.46■□□□□ 0.23
ATPAF1Q5TC12 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.46■□□□□ 0.23
ATPAF1Q5TC12 RN7SL471P-201ENST00000580476 299 ntBASIC16.46■□□□□ 0.23
ATPAF1Q5TC12 AC073648.6-201ENST00000641589 218 ntBASIC16.46■□□□□ 0.23
ATPAF1Q5TC12 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATPAF1Q5TC12 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
ATPAF1Q5TC12 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATPAF1Q5TC12 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.46■□□□□ 0.23
ATPAF1Q5TC12 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATPAF1Q5TC12 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.46■□□□□ 0.23
ATPAF1Q5TC12 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms