Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.94
KCNA1Q09470 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.89■□□□□ 0.94
KCNA1Q09470 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNA1Q09470 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNA1Q09470 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
KCNA1Q09470 KRT17P2-201ENST00000300992 1314 ntBASIC20.89■□□□□ 0.93
KCNA1Q09470 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNA1Q09470 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KCNA1Q09470 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNA1Q09470 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNA1Q09470 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNA1Q09470 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
KCNA1Q09470 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
KCNA1Q09470 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.89■□□□□ 0.93
KCNA1Q09470 MFAP1P1-201ENST00000442257 1255 ntBASIC20.89■□□□□ 0.93
KCNA1Q09470 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.89■□□□□ 0.93
KCNA1Q09470 DGCR10-201ENST00000609839 495 ntBASIC20.89■□□□□ 0.93
KCNA1Q09470 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNA1Q09470 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNA1Q09470 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNA1Q09470 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNA1Q09470 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
KCNA1Q09470 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.89■□□□□ 0.93
KCNA1Q09470 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNA1Q09470 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
KCNA1Q09470 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNA1Q09470 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KCNA1Q09470 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNA1Q09470 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
KCNA1Q09470 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
KCNA1Q09470 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNA1Q09470 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNA1Q09470 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.88■□□□□ 0.93
KCNA1Q09470 UNC93B2-201ENST00000285383 730 ntBASIC20.88■□□□□ 0.93
KCNA1Q09470 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNA1Q09470 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.88■□□□□ 0.93
KCNA1Q09470 CRYGFP-201ENST00000418459 633 ntBASIC20.88■□□□□ 0.93
KCNA1Q09470 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
KCNA1Q09470 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.88■□□□□ 0.93
KCNA1Q09470 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KCNA1Q09470 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.88■□□□□ 0.93
KCNA1Q09470 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
KCNA1Q09470 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.88■□□□□ 0.93
KCNA1Q09470 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNA1Q09470 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNA1Q09470 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNA1Q09470 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
KCNA1Q09470 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNA1Q09470 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KCNA1Q09470 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.88■□□□□ 0.93
KCNA1Q09470 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNA1Q09470 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
KCNA1Q09470 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
KCNA1Q09470 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
KCNA1Q09470 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KCNA1Q09470 BX323043.1-201ENST00000641006 1765 ntBASIC20.87■□□□□ 0.93
KCNA1Q09470 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNA1Q09470 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNA1Q09470 TNXA-203ENST00000507684 2038 ntBASIC20.87■□□□□ 0.93
KCNA1Q09470 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.87■□□□□ 0.93
KCNA1Q09470 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNA1Q09470 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.87■□□□□ 0.93
KCNA1Q09470 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNA1Q09470 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNA1Q09470 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.87■□□□□ 0.93
KCNA1Q09470 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.87■□□□□ 0.93
KCNA1Q09470 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.87■□□□□ 0.93
KCNA1Q09470 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KCNA1Q09470 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNA1Q09470 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.87■□□□□ 0.93
KCNA1Q09470 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNA1Q09470 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
KCNA1Q09470 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNA1Q09470 KRT8P9-201ENST00000558927 1449 ntBASIC20.87■□□□□ 0.93
KCNA1Q09470 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.86■□□□□ 0.93
KCNA1Q09470 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNA1Q09470 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNA1Q09470 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
KCNA1Q09470 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNA1Q09470 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNA1Q09470 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KCNA1Q09470 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.86■□□□□ 0.93
KCNA1Q09470 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KCNA1Q09470 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNA1Q09470 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.86■□□□□ 0.93
KCNA1Q09470 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KCNA1Q09470 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.86■□□□□ 0.93
KCNA1Q09470 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
KCNA1Q09470 AC004408.2-201ENST00000623613 2777 ntBASIC20.86■□□□□ 0.93
KCNA1Q09470 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNA1Q09470 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNA1Q09470 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.86■□□□□ 0.93
KCNA1Q09470 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNA1Q09470 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNA1Q09470 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.85■□□□□ 0.93
KCNA1Q09470 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KCNA1Q09470 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
KCNA1Q09470 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNA1Q09470 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNA1Q09470 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms