Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.03■□□□□ 0.16
COL10A1Q03692 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL10A1Q03692 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.03■□□□□ 0.16
COL10A1Q03692 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COL10A1Q03692 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.03■□□□□ 0.16
COL10A1Q03692 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.03■□□□□ 0.16
COL10A1Q03692 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.03■□□□□ 0.16
COL10A1Q03692 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.03■□□□□ 0.16
COL10A1Q03692 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COL10A1Q03692 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.03■□□□□ 0.16
COL10A1Q03692 RARRES2P10-201ENST00000564312 460 ntBASIC16.03■□□□□ 0.16
COL10A1Q03692 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.03■□□□□ 0.16
COL10A1Q03692 AL353708.3-201ENST00000610272 989 ntBASIC16.03■□□□□ 0.16
COL10A1Q03692 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL10A1Q03692 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL10A1Q03692 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.03■□□□□ 0.16
COL10A1Q03692 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL10A1Q03692 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COL10A1Q03692 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.03■□□□□ 0.16
COL10A1Q03692 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.03■□□□□ 0.16
COL10A1Q03692 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
COL10A1Q03692 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
COL10A1Q03692 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL10A1Q03692 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.02■□□□□ 0.16
COL10A1Q03692 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
COL10A1Q03692 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
COL10A1Q03692 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL10A1Q03692 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL10A1Q03692 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL10A1Q03692 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
COL10A1Q03692 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
COL10A1Q03692 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COL10A1Q03692 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COL10A1Q03692 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL10A1Q03692 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL10A1Q03692 KSR1P1-201ENST00000446298 240 ntBASIC16.02■□□□□ 0.16
COL10A1Q03692 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COL10A1Q03692 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COL10A1Q03692 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.02■□□□□ 0.16
COL10A1Q03692 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.02■□□□□ 0.16
COL10A1Q03692 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.02■□□□□ 0.16
COL10A1Q03692 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.02■□□□□ 0.16
COL10A1Q03692 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.02■□□□□ 0.16
COL10A1Q03692 AF186192.3-201ENST00000583427 947 ntBASIC16.02■□□□□ 0.16
COL10A1Q03692 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.02■□□□□ 0.16
COL10A1Q03692 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL10A1Q03692 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.02■□□□□ 0.16
COL10A1Q03692 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
COL10A1Q03692 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
COL10A1Q03692 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
COL10A1Q03692 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
COL10A1Q03692 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
COL10A1Q03692 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
COL10A1Q03692 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
COL10A1Q03692 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
COL10A1Q03692 FP475955.4-201ENST00000623131 1990 ntBASIC16.02■□□□□ 0.15
COL10A1Q03692 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
COL10A1Q03692 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
COL10A1Q03692 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
COL10A1Q03692 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.02■□□□□ 0.15
COL10A1Q03692 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
COL10A1Q03692 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
COL10A1Q03692 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL10A1Q03692 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL10A1Q03692 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.01■□□□□ 0.15
COL10A1Q03692 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.01■□□□□ 0.15
COL10A1Q03692 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL10A1Q03692 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL10A1Q03692 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
COL10A1Q03692 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COL10A1Q03692 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
COL10A1Q03692 AC004980.1-204ENST00000429707 299 ntBASIC16.01■□□□□ 0.15
COL10A1Q03692 TSPY21P-201ENST00000433481 731 ntBASIC16.01■□□□□ 0.15
COL10A1Q03692 GCSHP5-201ENST00000443090 522 ntBASIC16.01■□□□□ 0.15
COL10A1Q03692 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COL10A1Q03692 Z85996.1-201ENST00000494644 937 ntBASIC16.01■□□□□ 0.15
COL10A1Q03692 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.01■□□□□ 0.15
COL10A1Q03692 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.01■□□□□ 0.15
COL10A1Q03692 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.01■□□□□ 0.15
COL10A1Q03692 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.01■□□□□ 0.15
COL10A1Q03692 CR392000.1-201ENST00000624770 1228 ntBASIC16.01■□□□□ 0.15
COL10A1Q03692 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL10A1Q03692 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL10A1Q03692 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL10A1Q03692 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COL10A1Q03692 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL10A1Q03692 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.01■□□□□ 0.15
COL10A1Q03692 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL10A1Q03692 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL10A1Q03692 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL10A1Q03692 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.01■□□□□ 0.15
COL10A1Q03692 KRT16P1-201ENST00000399124 1418 ntBASIC16.01■□□□□ 0.15
COL10A1Q03692 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COL10A1Q03692 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL10A1Q03692 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COL10A1Q03692 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.01■□□□□ 0.15
COL10A1Q03692 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL10A1Q03692 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COL10A1Q03692 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.01■□□□□ 0.15
COL10A1Q03692 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms