Protein–RNA interactions for Protein: P78414

IRX1, Iroquois-class homeodomain protein IRX-1, humanhuman

Predicted RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX1P78414 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
IRX1P78414 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
IRX1P78414 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IRX1P78414 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
IRX1P78414 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.67■□□□□ 0.58
IRX1P78414 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IRX1P78414 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.67■□□□□ 0.58
IRX1P78414 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.67■□□□□ 0.58
IRX1P78414 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX1P78414 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX1P78414 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IRX1P78414 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX1P78414 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX1P78414 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
IRX1P78414 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX1P78414 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
IRX1P78414 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX1P78414 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
IRX1P78414 AC004911.1-201ENST00000416316 871 ntBASIC18.66■□□□□ 0.58
IRX1P78414 AL512625.2-201ENST00000417533 625 ntBASIC18.66■□□□□ 0.58
IRX1P78414 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
IRX1P78414 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX1P78414 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX1P78414 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX1P78414 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX1P78414 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IRX1P78414 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IRX1P78414 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IRX1P78414 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IRX1P78414 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.66■□□□□ 0.58
IRX1P78414 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.66■□□□□ 0.58
IRX1P78414 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX1P78414 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IRX1P78414 AL031598.1-201ENST00000561511 1773 ntBASIC18.65■□□□□ 0.58
IRX1P78414 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
IRX1P78414 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
IRX1P78414 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IRX1P78414 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
IRX1P78414 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.65■□□□□ 0.58
IRX1P78414 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
IRX1P78414 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IRX1P78414 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.65■□□□□ 0.58
IRX1P78414 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.65■□□□□ 0.58
IRX1P78414 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IRX1P78414 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.65■□□□□ 0.58
IRX1P78414 AC073210.2-201ENST00000430369 194 ntBASIC18.65■□□□□ 0.58
IRX1P78414 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.65■□□□□ 0.58
IRX1P78414 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.65■□□□□ 0.58
IRX1P78414 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.65■□□□□ 0.58
IRX1P78414 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IRX1P78414 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IRX1P78414 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IRX1P78414 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IRX1P78414 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IRX1P78414 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IRX1P78414 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
IRX1P78414 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IRX1P78414 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
IRX1P78414 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IRX1P78414 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
IRX1P78414 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.64■□□□□ 0.57
IRX1P78414 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.64■□□□□ 0.57
IRX1P78414 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
IRX1P78414 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IRX1P78414 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
IRX1P78414 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IRX1P78414 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.64■□□□□ 0.57
IRX1P78414 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.64■□□□□ 0.57
IRX1P78414 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IRX1P78414 CYP2T1P-201ENST00000432607 1285 ntBASIC18.64■□□□□ 0.57
IRX1P78414 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.64■□□□□ 0.57
IRX1P78414 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
IRX1P78414 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
IRX1P78414 AC137761.2-201ENST00000561729 223 ntBASIC18.64■□□□□ 0.57
IRX1P78414 AC145350.3-201ENST00000569033 163 ntBASIC18.64■□□□□ 0.57
IRX1P78414 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.64■□□□□ 0.57
IRX1P78414 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.64■□□□□ 0.57
IRX1P78414 AC231657.2-201ENST00000624556 255 ntBASIC18.64■□□□□ 0.57
IRX1P78414 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.64■□□□□ 0.57
IRX1P78414 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.64■□□□□ 0.57
IRX1P78414 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IRX1P78414 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
IRX1P78414 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
IRX1P78414 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
IRX1P78414 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.64■□□□□ 0.57
IRX1P78414 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
IRX1P78414 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
IRX1P78414 AC010980.2-201ENST00000587099 1412 ntBASIC18.64■□□□□ 0.57
IRX1P78414 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IRX1P78414 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
IRX1P78414 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IRX1P78414 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
IRX1P78414 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
IRX1P78414 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX1P78414 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
IRX1P78414 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX1P78414 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX1P78414 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
IRX1P78414 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX1P78414 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms