Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 KSR1P1-201ENST00000446298 240 ntBASIC19.73■□□□□ 0.75
IRX4P78413 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IRX4P78413 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
IRX4P78413 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
IRX4P78413 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.73■□□□□ 0.75
IRX4P78413 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.73■□□□□ 0.75
IRX4P78413 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
IRX4P78413 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
IRX4P78413 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
IRX4P78413 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
IRX4P78413 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
IRX4P78413 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IRX4P78413 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
IRX4P78413 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
IRX4P78413 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.72■□□□□ 0.75
IRX4P78413 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IRX4P78413 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
IRX4P78413 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IRX4P78413 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
IRX4P78413 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
IRX4P78413 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IRX4P78413 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
IRX4P78413 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
IRX4P78413 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
IRX4P78413 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.72■□□□□ 0.75
IRX4P78413 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.72■□□□□ 0.75
IRX4P78413 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.72■□□□□ 0.75
IRX4P78413 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
IRX4P78413 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
IRX4P78413 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.72■□□□□ 0.75
IRX4P78413 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
IRX4P78413 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
IRX4P78413 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IRX4P78413 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
IRX4P78413 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
IRX4P78413 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
IRX4P78413 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
IRX4P78413 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
IRX4P78413 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
IRX4P78413 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
IRX4P78413 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IRX4P78413 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
IRX4P78413 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.71■□□□□ 0.75
IRX4P78413 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
IRX4P78413 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
IRX4P78413 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IRX4P78413 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
IRX4P78413 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.71■□□□□ 0.75
IRX4P78413 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.71■□□□□ 0.75
IRX4P78413 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.71■□□□□ 0.75
IRX4P78413 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
IRX4P78413 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.71■□□□□ 0.75
IRX4P78413 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.71■□□□□ 0.75
IRX4P78413 WWOX-216ENST00000569818 525 ntBASIC19.71■□□□□ 0.75
IRX4P78413 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.71■□□□□ 0.75
IRX4P78413 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
IRX4P78413 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
IRX4P78413 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
IRX4P78413 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.74
IRX4P78413 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
IRX4P78413 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
IRX4P78413 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.7■□□□□ 0.74
IRX4P78413 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
IRX4P78413 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
IRX4P78413 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
IRX4P78413 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
IRX4P78413 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.7■□□□□ 0.74
IRX4P78413 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
IRX4P78413 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
IRX4P78413 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.7■□□□□ 0.74
IRX4P78413 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.7■□□□□ 0.74
IRX4P78413 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.7■□□□□ 0.74
IRX4P78413 AC010203.1-204ENST00000548782 407 ntBASIC19.7■□□□□ 0.74
IRX4P78413 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.7■□□□□ 0.74
IRX4P78413 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
IRX4P78413 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.7■□□□□ 0.74
IRX4P78413 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
IRX4P78413 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.7■□□□□ 0.74
IRX4P78413 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
IRX4P78413 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
IRX4P78413 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
IRX4P78413 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
IRX4P78413 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
IRX4P78413 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
IRX4P78413 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.69■□□□□ 0.74
IRX4P78413 KRT16P1-201ENST00000399124 1418 ntBASIC19.69■□□□□ 0.74
IRX4P78413 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IRX4P78413 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IRX4P78413 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.69■□□□□ 0.74
IRX4P78413 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
IRX4P78413 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.69■□□□□ 0.74
IRX4P78413 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.69■□□□□ 0.74
IRX4P78413 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IRX4P78413 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IRX4P78413 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IRX4P78413 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IRX4P78413 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.69■□□□□ 0.74
IRX4P78413 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IRX4P78413 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
IRX4P78413 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms