Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.68■■□□□ 1.06
CHMP4BP1P59074 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CHMP4BP1P59074 AC116562.4-202ENST00000641738 218 ntBASIC21.68■■□□□ 1.06
CHMP4BP1P59074 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.68■■□□□ 1.06
CHMP4BP1P59074 KRT8P8-201ENST00000434750 1448 ntBASIC21.68■■□□□ 1.06
CHMP4BP1P59074 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHMP4BP1P59074 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHMP4BP1P59074 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHMP4BP1P59074 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.68■■□□□ 1.06
CHMP4BP1P59074 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.68■■□□□ 1.06
CHMP4BP1P59074 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHMP4BP1P59074 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHMP4BP1P59074 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CHMP4BP1P59074 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP4BP1P59074 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CHMP4BP1P59074 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.67■■□□□ 1.06
CHMP4BP1P59074 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP4BP1P59074 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP4BP1P59074 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CHMP4BP1P59074 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP4BP1P59074 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CHMP4BP1P59074 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.67■■□□□ 1.06
CHMP4BP1P59074 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP4BP1P59074 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP4BP1P59074 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP4BP1P59074 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP4BP1P59074 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP4BP1P59074 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.67■■□□□ 1.06
CHMP4BP1P59074 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.67■■□□□ 1.06
CHMP4BP1P59074 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP4BP1P59074 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
CHMP4BP1P59074 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP4BP1P59074 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP4BP1P59074 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP4BP1P59074 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.66■■□□□ 1.06
CHMP4BP1P59074 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP4BP1P59074 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
CHMP4BP1P59074 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP4BP1P59074 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP4BP1P59074 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.66■■□□□ 1.06
CHMP4BP1P59074 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP4BP1P59074 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP4BP1P59074 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.66■■□□□ 1.06
CHMP4BP1P59074 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP4BP1P59074 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP4BP1P59074 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP4BP1P59074 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
CHMP4BP1P59074 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CHMP4BP1P59074 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.66■■□□□ 1.06
CHMP4BP1P59074 CCR12P-201ENST00000446203 998 ntBASIC21.66■■□□□ 1.06
CHMP4BP1P59074 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.66■■□□□ 1.06
CHMP4BP1P59074 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.66■■□□□ 1.06
CHMP4BP1P59074 AC139887.4-201ENST00000607877 719 ntBASIC21.66■■□□□ 1.06
CHMP4BP1P59074 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP4BP1P59074 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP4BP1P59074 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
CHMP4BP1P59074 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP4BP1P59074 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP4BP1P59074 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CHMP4BP1P59074 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CHMP4BP1P59074 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP4BP1P59074 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.65■■□□□ 1.06
CHMP4BP1P59074 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.65■■□□□ 1.06
CHMP4BP1P59074 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP4BP1P59074 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP4BP1P59074 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CHMP4BP1P59074 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CHMP4BP1P59074 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP4BP1P59074 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.65■■□□□ 1.06
CHMP4BP1P59074 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.65■■□□□ 1.06
CHMP4BP1P59074 BX664615.1-201ENST00000443558 458 ntBASIC21.65■■□□□ 1.06
CHMP4BP1P59074 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.65■■□□□ 1.06
CHMP4BP1P59074 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP4BP1P59074 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CHMP4BP1P59074 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC21.65■■□□□ 1.06
CHMP4BP1P59074 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.65■■□□□ 1.06
CHMP4BP1P59074 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP4BP1P59074 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP4BP1P59074 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP4BP1P59074 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CHMP4BP1P59074 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP4BP1P59074 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP4BP1P59074 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CHMP4BP1P59074 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CHMP4BP1P59074 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.64■■□□□ 1.06
CHMP4BP1P59074 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.64■■□□□ 1.06
CHMP4BP1P59074 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CHMP4BP1P59074 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHMP4BP1P59074 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHMP4BP1P59074 HMGA1P5-201ENST00000412453 271 ntBASIC21.64■■□□□ 1.05
CHMP4BP1P59074 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.64■■□□□ 1.05
CHMP4BP1P59074 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.64■■□□□ 1.05
CHMP4BP1P59074 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.64■■□□□ 1.05
CHMP4BP1P59074 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
CHMP4BP1P59074 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.64■■□□□ 1.05
CHMP4BP1P59074 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.64■■□□□ 1.05
CHMP4BP1P59074 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHMP4BP1P59074 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.64■■□□□ 1.05
CHMP4BP1P59074 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP4BP1P59074 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms