Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP1S2P56377 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP1S2P56377 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.5■□□□□ 0.55
AP1S2P56377 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S2P56377 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S2P56377 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S2P56377 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S2P56377 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S2P56377 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S2P56377 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S2P56377 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S2P56377 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S2P56377 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S2P56377 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
AP1S2P56377 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S2P56377 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
AP1S2P56377 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
AP1S2P56377 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S2P56377 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S2P56377 AC011506.1-201ENST00000474329 610 ntBASIC18.5■□□□□ 0.55
AP1S2P56377 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.5■□□□□ 0.55
AP1S2P56377 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
AP1S2P56377 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.5■□□□□ 0.55
AP1S2P56377 AL049637.2-201ENST00000641778 930 ntBASIC18.5■□□□□ 0.55
AP1S2P56377 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S2P56377 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.5■□□□□ 0.55
AP1S2P56377 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S2P56377 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S2P56377 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S2P56377 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
AP1S2P56377 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.5■□□□□ 0.55
AP1S2P56377 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.49■□□□□ 0.55
AP1S2P56377 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AP1S2P56377 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
AP1S2P56377 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
AP1S2P56377 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP1S2P56377 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP1S2P56377 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
AP1S2P56377 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP1S2P56377 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP1S2P56377 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
AP1S2P56377 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP1S2P56377 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
AP1S2P56377 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP1S2P56377 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AP1S2P56377 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
AP1S2P56377 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP1S2P56377 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
AP1S2P56377 AC116562.2-201ENST00000507042 360 ntBASIC18.49■□□□□ 0.55
AP1S2P56377 NUDT16P1-203ENST00000513809 620 ntBASIC18.49■□□□□ 0.55
AP1S2P56377 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.49■□□□□ 0.55
AP1S2P56377 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.49■□□□□ 0.55
AP1S2P56377 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.49■□□□□ 0.55
AP1S2P56377 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.49■□□□□ 0.55
AP1S2P56377 DGCR10-201ENST00000609839 495 ntBASIC18.49■□□□□ 0.55
AP1S2P56377 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.49■□□□□ 0.55
AP1S2P56377 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
AP1S2P56377 AC083906.6-201ENST00000641366 219 ntBASIC18.49■□□□□ 0.55
AP1S2P56377 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.49■□□□□ 0.55
AP1S2P56377 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP1S2P56377 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.49■□□□□ 0.55
AP1S2P56377 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.49■□□□□ 0.55
AP1S2P56377 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP1S2P56377 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.49■□□□□ 0.55
AP1S2P56377 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AP1S2P56377 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
AP1S2P56377 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AP1S2P56377 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP1S2P56377 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP1S2P56377 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.49■□□□□ 0.55
AP1S2P56377 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.48■□□□□ 0.55
AP1S2P56377 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP1S2P56377 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
AP1S2P56377 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.48■□□□□ 0.55
AP1S2P56377 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP1S2P56377 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
AP1S2P56377 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP1S2P56377 MIR718-201ENST00000390190 70 ntBASIC18.48■□□□□ 0.55
AP1S2P56377 MESTP1-201ENST00000404287 994 ntBASIC18.48■□□□□ 0.55
AP1S2P56377 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.48■□□□□ 0.55
AP1S2P56377 AC008040.2-201ENST00000461049 708 ntBASIC18.48■□□□□ 0.55
AP1S2P56377 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.48■□□□□ 0.55
AP1S2P56377 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.48■□□□□ 0.55
AP1S2P56377 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.48■□□□□ 0.55
AP1S2P56377 CKBP1-201ENST00000565489 1086 ntBASIC18.48■□□□□ 0.55
AP1S2P56377 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.48■□□□□ 0.55
AP1S2P56377 AP000692.2-201ENST00000608391 879 ntBASIC18.48■□□□□ 0.55
AP1S2P56377 AC113410.3-201ENST00000623366 203 ntBASIC18.48■□□□□ 0.55
AP1S2P56377 CROCCP3-202ENST00000420820 1947 ntBASIC18.48■□□□□ 0.55
AP1S2P56377 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP1S2P56377 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP1S2P56377 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP1S2P56377 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
AP1S2P56377 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.48■□□□□ 0.55
AP1S2P56377 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.48■□□□□ 0.55
AP1S2P56377 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
AP1S2P56377 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
AP1S2P56377 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
AP1S2P56377 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP1S2P56377 AC093525.10-201ENST00000625130 1569 ntBASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms