Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.82■□□□□ 0.92
NCKAP1LP55160 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NCKAP1LP55160 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.82■□□□□ 0.92
NCKAP1LP55160 AC133561.5-201ENST00000635547 218 ntBASIC20.82■□□□□ 0.92
NCKAP1LP55160 AC116562.4-202ENST00000641738 218 ntBASIC20.82■□□□□ 0.92
NCKAP1LP55160 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCKAP1LP55160 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.82■□□□□ 0.92
NCKAP1LP55160 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCKAP1LP55160 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCKAP1LP55160 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
NCKAP1LP55160 LINC01568-207ENST00000641790 1380 ntBASIC20.82■□□□□ 0.92
NCKAP1LP55160 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.82■□□□□ 0.92
NCKAP1LP55160 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.82■□□□□ 0.92
NCKAP1LP55160 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.82■□□□□ 0.92
NCKAP1LP55160 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCKAP1LP55160 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCKAP1LP55160 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NCKAP1LP55160 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCKAP1LP55160 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.81■□□□□ 0.92
NCKAP1LP55160 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCKAP1LP55160 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCKAP1LP55160 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCKAP1LP55160 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCKAP1LP55160 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.81■□□□□ 0.92
NCKAP1LP55160 AC007663.1-201ENST00000438948 1240 ntBASIC20.81■□□□□ 0.92
NCKAP1LP55160 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.81■□□□□ 0.92
NCKAP1LP55160 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.81■□□□□ 0.92
NCKAP1LP55160 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.81■□□□□ 0.92
NCKAP1LP55160 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.81■□□□□ 0.92
NCKAP1LP55160 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.81■□□□□ 0.92
NCKAP1LP55160 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
NCKAP1LP55160 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
NCKAP1LP55160 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCKAP1LP55160 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.81■□□□□ 0.92
NCKAP1LP55160 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.81■□□□□ 0.92
NCKAP1LP55160 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCKAP1LP55160 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NCKAP1LP55160 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NCKAP1LP55160 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCKAP1LP55160 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NCKAP1LP55160 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NCKAP1LP55160 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NCKAP1LP55160 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.8■□□□□ 0.92
NCKAP1LP55160 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NCKAP1LP55160 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.8■□□□□ 0.92
NCKAP1LP55160 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
NCKAP1LP55160 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NCKAP1LP55160 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NCKAP1LP55160 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.8■□□□□ 0.92
NCKAP1LP55160 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NCKAP1LP55160 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.8■□□□□ 0.92
NCKAP1LP55160 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NCKAP1LP55160 AC211429.1-201ENST00000415277 523 ntBASIC20.8■□□□□ 0.92
NCKAP1LP55160 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NCKAP1LP55160 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.8■□□□□ 0.92
NCKAP1LP55160 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.8■□□□□ 0.92
NCKAP1LP55160 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.8■□□□□ 0.92
NCKAP1LP55160 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
NCKAP1LP55160 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NCKAP1LP55160 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
NCKAP1LP55160 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NCKAP1LP55160 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NCKAP1LP55160 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NCKAP1LP55160 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCKAP1LP55160 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.79■□□□□ 0.92
NCKAP1LP55160 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCKAP1LP55160 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.79■□□□□ 0.92
NCKAP1LP55160 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.79■□□□□ 0.92
NCKAP1LP55160 AL512353.2-201ENST00000448759 1962 ntBASIC20.79■□□□□ 0.92
NCKAP1LP55160 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
NCKAP1LP55160 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCKAP1LP55160 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NCKAP1LP55160 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NCKAP1LP55160 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCKAP1LP55160 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCKAP1LP55160 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.79■□□□□ 0.92
NCKAP1LP55160 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCKAP1LP55160 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.79■□□□□ 0.92
NCKAP1LP55160 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.79■□□□□ 0.92
NCKAP1LP55160 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NCKAP1LP55160 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.79■□□□□ 0.92
NCKAP1LP55160 AP003041.3-201ENST00000527151 707 ntBASIC20.79■□□□□ 0.92
NCKAP1LP55160 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.79■□□□□ 0.92
NCKAP1LP55160 AC010653.2-201ENST00000623505 997 ntBASIC20.79■□□□□ 0.92
NCKAP1LP55160 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.79■□□□□ 0.92
NCKAP1LP55160 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.79■□□□□ 0.92
NCKAP1LP55160 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.79■□□□□ 0.92
NCKAP1LP55160 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
NCKAP1LP55160 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.78■□□□□ 0.92
NCKAP1LP55160 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCKAP1LP55160 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCKAP1LP55160 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCKAP1LP55160 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
NCKAP1LP55160 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.78■□□□□ 0.92
NCKAP1LP55160 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCKAP1LP55160 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCKAP1LP55160 AC128688.1-201ENST00000487626 519 ntBASIC20.78■□□□□ 0.92
NCKAP1LP55160 MIR4674-201ENST00000582457 87 ntBASIC20.78■□□□□ 0.92
NCKAP1LP55160 FAM87A-204ENST00000613235 858 ntBASIC20.78■□□□□ 0.92
NCKAP1LP55160 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms