Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NR1H2P55055 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NR1H2P55055 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NR1H2P55055 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NR1H2P55055 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NR1H2P55055 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
NR1H2P55055 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
NR1H2P55055 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.97■□□□□ 0.47
NR1H2P55055 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NR1H2P55055 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NR1H2P55055 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.97■□□□□ 0.47
NR1H2P55055 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
NR1H2P55055 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
NR1H2P55055 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
NR1H2P55055 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.97■□□□□ 0.47
NR1H2P55055 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NR1H2P55055 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NR1H2P55055 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NR1H2P55055 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NR1H2P55055 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NR1H2P55055 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NR1H2P55055 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.96■□□□□ 0.47
NR1H2P55055 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NR1H2P55055 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NR1H2P55055 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NR1H2P55055 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
NR1H2P55055 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
NR1H2P55055 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NR1H2P55055 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NR1H2P55055 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
NR1H2P55055 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.96■□□□□ 0.47
NR1H2P55055 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.96■□□□□ 0.47
NR1H2P55055 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.96■□□□□ 0.47
NR1H2P55055 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NR1H2P55055 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.96■□□□□ 0.47
NR1H2P55055 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.96■□□□□ 0.47
NR1H2P55055 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
NR1H2P55055 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.96■□□□□ 0.47
NR1H2P55055 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.96■□□□□ 0.47
NR1H2P55055 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NR1H2P55055 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.96■□□□□ 0.47
NR1H2P55055 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NR1H2P55055 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NR1H2P55055 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NR1H2P55055 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
NR1H2P55055 ABALON-201ENST00000629058 1903 ntBASIC17.96■□□□□ 0.47
NR1H2P55055 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H2P55055 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.95■□□□□ 0.46
NR1H2P55055 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H2P55055 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H2P55055 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H2P55055 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H2P55055 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H2P55055 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H2P55055 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H2P55055 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
NR1H2P55055 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H2P55055 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H2P55055 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H2P55055 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H2P55055 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H2P55055 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
NR1H2P55055 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H2P55055 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H2P55055 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.95■□□□□ 0.46
NR1H2P55055 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H2P55055 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.95■□□□□ 0.46
NR1H2P55055 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.95■□□□□ 0.46
NR1H2P55055 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
NR1H2P55055 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.95■□□□□ 0.46
NR1H2P55055 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H2P55055 AL589743.5-201ENST00000616611 1050 ntBASIC17.95■□□□□ 0.46
NR1H2P55055 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.95■□□□□ 0.46
NR1H2P55055 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.95■□□□□ 0.46
NR1H2P55055 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H2P55055 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H2P55055 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
NR1H2P55055 KRT8P36-201ENST00000489121 1440 ntBASIC17.95■□□□□ 0.46
NR1H2P55055 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H2P55055 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
NR1H2P55055 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H2P55055 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.95■□□□□ 0.46
NR1H2P55055 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H2P55055 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.95■□□□□ 0.46
NR1H2P55055 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
NR1H2P55055 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NR1H2P55055 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
NR1H2P55055 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NR1H2P55055 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NR1H2P55055 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
NR1H2P55055 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NR1H2P55055 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NR1H2P55055 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NR1H2P55055 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NR1H2P55055 MCRIP2P1-201ENST00000394346 511 ntBASIC17.94■□□□□ 0.46
NR1H2P55055 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NR1H2P55055 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
NR1H2P55055 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.94■□□□□ 0.46
NR1H2P55055 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.94■□□□□ 0.46
NR1H2P55055 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms