Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPHA4P54764 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
EPHA4P54764 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPHA4P54764 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EPHA4P54764 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EPHA4P54764 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.29■□□□□ 0.52
EPHA4P54764 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EPHA4P54764 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.29■□□□□ 0.52
EPHA4P54764 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
EPHA4P54764 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
EPHA4P54764 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EPHA4P54764 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EPHA4P54764 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.29■□□□□ 0.52
EPHA4P54764 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.29■□□□□ 0.52
EPHA4P54764 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.29■□□□□ 0.52
EPHA4P54764 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.29■□□□□ 0.52
EPHA4P54764 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.29■□□□□ 0.52
EPHA4P54764 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.29■□□□□ 0.52
EPHA4P54764 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.29■□□□□ 0.52
EPHA4P54764 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EPHA4P54764 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EPHA4P54764 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.29■□□□□ 0.52
EPHA4P54764 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
EPHA4P54764 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
EPHA4P54764 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EPHA4P54764 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.29■□□□□ 0.52
EPHA4P54764 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EPHA4P54764 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.29■□□□□ 0.52
EPHA4P54764 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EPHA4P54764 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EPHA4P54764 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
EPHA4P54764 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EPHA4P54764 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EPHA4P54764 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.28■□□□□ 0.52
EPHA4P54764 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EPHA4P54764 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.28■□□□□ 0.52
EPHA4P54764 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
EPHA4P54764 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.28■□□□□ 0.52
EPHA4P54764 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EPHA4P54764 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
EPHA4P54764 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.28■□□□□ 0.52
EPHA4P54764 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.28■□□□□ 0.52
EPHA4P54764 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.28■□□□□ 0.52
EPHA4P54764 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.28■□□□□ 0.52
EPHA4P54764 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EPHA4P54764 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.28■□□□□ 0.52
EPHA4P54764 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.28■□□□□ 0.52
EPHA4P54764 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
EPHA4P54764 CR769767.2-201ENST00000622735 460 ntBASIC18.28■□□□□ 0.52
EPHA4P54764 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
EPHA4P54764 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
EPHA4P54764 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
EPHA4P54764 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
EPHA4P54764 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EPHA4P54764 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.28■□□□□ 0.52
EPHA4P54764 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.28■□□□□ 0.52
EPHA4P54764 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EPHA4P54764 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EPHA4P54764 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.27■□□□□ 0.52
EPHA4P54764 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
EPHA4P54764 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EPHA4P54764 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EPHA4P54764 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
EPHA4P54764 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.27■□□□□ 0.52
EPHA4P54764 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.27■□□□□ 0.52
EPHA4P54764 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.27■□□□□ 0.52
EPHA4P54764 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
EPHA4P54764 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
EPHA4P54764 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.27■□□□□ 0.52
EPHA4P54764 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
EPHA4P54764 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.27■□□□□ 0.52
EPHA4P54764 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.27■□□□□ 0.52
EPHA4P54764 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.27■□□□□ 0.52
EPHA4P54764 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.27■□□□□ 0.52
EPHA4P54764 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.27■□□□□ 0.52
EPHA4P54764 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.27■□□□□ 0.52
EPHA4P54764 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.27■□□□□ 0.52
EPHA4P54764 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
EPHA4P54764 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EPHA4P54764 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.27■□□□□ 0.52
EPHA4P54764 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EPHA4P54764 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
EPHA4P54764 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
EPHA4P54764 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
EPHA4P54764 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.27■□□□□ 0.51
EPHA4P54764 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
EPHA4P54764 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.26■□□□□ 0.51
EPHA4P54764 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EPHA4P54764 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EPHA4P54764 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.26■□□□□ 0.51
EPHA4P54764 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.26■□□□□ 0.51
EPHA4P54764 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
EPHA4P54764 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EPHA4P54764 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
EPHA4P54764 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.26■□□□□ 0.51
EPHA4P54764 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
EPHA4P54764 AL031133.1-201ENST00000406807 723 ntBASIC18.26■□□□□ 0.51
EPHA4P54764 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
EPHA4P54764 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.26■□□□□ 0.51
EPHA4P54764 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms