Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AL031598.1-201ENST00000561511 1773 ntBASIC19.17■□□□□ 0.66
LIMK2P53671 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.17■□□□□ 0.66
LIMK2P53671 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LIMK2P53671 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.17■□□□□ 0.66
LIMK2P53671 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LIMK2P53671 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LIMK2P53671 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIMK2P53671 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
LIMK2P53671 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LIMK2P53671 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIMK2P53671 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.17■□□□□ 0.66
LIMK2P53671 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LIMK2P53671 AL355075.4-201ENST00000554988 638 ntBASIC19.17■□□□□ 0.66
LIMK2P53671 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.17■□□□□ 0.66
LIMK2P53671 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.17■□□□□ 0.66
LIMK2P53671 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LIMK2P53671 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.17■□□□□ 0.66
LIMK2P53671 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.17■□□□□ 0.66
LIMK2P53671 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.17■□□□□ 0.66
LIMK2P53671 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIMK2P53671 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIMK2P53671 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIMK2P53671 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LIMK2P53671 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.17■□□□□ 0.66
LIMK2P53671 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
LIMK2P53671 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.17■□□□□ 0.66
LIMK2P53671 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
LIMK2P53671 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LIMK2P53671 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
LIMK2P53671 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.16■□□□□ 0.66
LIMK2P53671 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LIMK2P53671 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.16■□□□□ 0.66
LIMK2P53671 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LIMK2P53671 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LIMK2P53671 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LIMK2P53671 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.16■□□□□ 0.66
LIMK2P53671 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
LIMK2P53671 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.16■□□□□ 0.66
LIMK2P53671 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LIMK2P53671 TSPY15P-201ENST00000457163 923 ntBASIC19.16■□□□□ 0.66
LIMK2P53671 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.16■□□□□ 0.66
LIMK2P53671 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.16■□□□□ 0.66
LIMK2P53671 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.16■□□□□ 0.66
LIMK2P53671 AC004264.1-201ENST00000608354 794 ntBASIC19.16■□□□□ 0.66
LIMK2P53671 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.16■□□□□ 0.66
LIMK2P53671 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LIMK2P53671 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.16■□□□□ 0.66
LIMK2P53671 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LIMK2P53671 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LIMK2P53671 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LIMK2P53671 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
LIMK2P53671 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LIMK2P53671 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.16■□□□□ 0.66
LIMK2P53671 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LIMK2P53671 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LIMK2P53671 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LIMK2P53671 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
LIMK2P53671 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIMK2P53671 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
LIMK2P53671 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIMK2P53671 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LIMK2P53671 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
LIMK2P53671 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIMK2P53671 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIMK2P53671 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.15■□□□□ 0.66
LIMK2P53671 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.15■□□□□ 0.66
LIMK2P53671 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
LIMK2P53671 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LIMK2P53671 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LIMK2P53671 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.15■□□□□ 0.66
LIMK2P53671 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.15■□□□□ 0.66
LIMK2P53671 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.15■□□□□ 0.66
LIMK2P53671 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.15■□□□□ 0.66
LIMK2P53671 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.15■□□□□ 0.66
LIMK2P53671 AC026471.5-201ENST00000615068 467 ntBASIC19.15■□□□□ 0.66
LIMK2P53671 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
LIMK2P53671 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIMK2P53671 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LIMK2P53671 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LIMK2P53671 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
LIMK2P53671 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.14■□□□□ 0.66
LIMK2P53671 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
LIMK2P53671 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.14■□□□□ 0.66
LIMK2P53671 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LIMK2P53671 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LIMK2P53671 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LIMK2P53671 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LIMK2P53671 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
LIMK2P53671 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LIMK2P53671 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
LIMK2P53671 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LIMK2P53671 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.14■□□□□ 0.65
LIMK2P53671 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.14■□□□□ 0.65
LIMK2P53671 CD177P1-201ENST00000606252 935 ntBASIC19.14■□□□□ 0.65
LIMK2P53671 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LIMK2P53671 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.14■□□□□ 0.65
LIMK2P53671 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
LIMK2P53671 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LIMK2P53671 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
LIMK2P53671 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms