Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC1A1P43005 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SLC1A1P43005 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC1A1P43005 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC1A1P43005 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SLC1A1P43005 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC1A1P43005 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC1A1P43005 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC1A1P43005 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC1A1P43005 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.9■□□□□ 0.78
SLC1A1P43005 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC1A1P43005 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC1A1P43005 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
SLC1A1P43005 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.9■□□□□ 0.78
SLC1A1P43005 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.9■□□□□ 0.78
SLC1A1P43005 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.9■□□□□ 0.78
SLC1A1P43005 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC1A1P43005 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC1A1P43005 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.9■□□□□ 0.78
SLC1A1P43005 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SLC1A1P43005 AC079598.2-202ENST00000546624 1451 ntBASIC19.9■□□□□ 0.78
SLC1A1P43005 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC1A1P43005 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.9■□□□□ 0.78
SLC1A1P43005 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC1A1P43005 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.9■□□□□ 0.78
SLC1A1P43005 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
SLC1A1P43005 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.9■□□□□ 0.78
SLC1A1P43005 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SLC1A1P43005 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC1A1P43005 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SLC1A1P43005 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC1A1P43005 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SLC1A1P43005 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.78
SLC1A1P43005 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC1A1P43005 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SLC1A1P43005 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC1A1P43005 ESRRAP1-201ENST00000400596 1257 ntBASIC19.89■□□□□ 0.77
SLC1A1P43005 POU5F1P3-201ENST00000428824 1078 ntBASIC19.89■□□□□ 0.77
SLC1A1P43005 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.89■□□□□ 0.77
SLC1A1P43005 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.89■□□□□ 0.77
SLC1A1P43005 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.89■□□□□ 0.77
SLC1A1P43005 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SLC1A1P43005 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.89■□□□□ 0.77
SLC1A1P43005 AC124016.1-201ENST00000609552 612 ntBASIC19.89■□□□□ 0.77
SLC1A1P43005 AC110285.5-201ENST00000611501 352 ntBASIC19.89■□□□□ 0.77
SLC1A1P43005 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC1A1P43005 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.89■□□□□ 0.77
SLC1A1P43005 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.89■□□□□ 0.77
SLC1A1P43005 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
SLC1A1P43005 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC1A1P43005 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC1A1P43005 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.88■□□□□ 0.77
SLC1A1P43005 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SLC1A1P43005 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC1A1P43005 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.88■□□□□ 0.77
SLC1A1P43005 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC1A1P43005 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SLC1A1P43005 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SLC1A1P43005 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC1A1P43005 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC1A1P43005 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC1A1P43005 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.88■□□□□ 0.77
SLC1A1P43005 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SLC1A1P43005 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SLC1A1P43005 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.88■□□□□ 0.77
SLC1A1P43005 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SLC1A1P43005 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.88■□□□□ 0.77
SLC1A1P43005 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.88■□□□□ 0.77
SLC1A1P43005 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.88■□□□□ 0.77
SLC1A1P43005 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.88■□□□□ 0.77
SLC1A1P43005 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.88■□□□□ 0.77
SLC1A1P43005 RN7SL471P-201ENST00000580476 299 ntBASIC19.88■□□□□ 0.77
SLC1A1P43005 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.88■□□□□ 0.77
SLC1A1P43005 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC1A1P43005 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC1A1P43005 AC104581.1-202ENST00000635932 2618 ntBASIC19.88■□□□□ 0.77
SLC1A1P43005 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC1A1P43005 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SLC1A1P43005 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC1A1P43005 AC005082.1-201ENST00000413042 2259 ntBASIC19.87■□□□□ 0.77
SLC1A1P43005 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC1A1P43005 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC1A1P43005 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SLC1A1P43005 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC1A1P43005 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.87■□□□□ 0.77
SLC1A1P43005 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.87■□□□□ 0.77
SLC1A1P43005 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC1A1P43005 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
SLC1A1P43005 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC1A1P43005 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLC1A1P43005 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC1A1P43005 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC1A1P43005 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.87■□□□□ 0.77
SLC1A1P43005 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.87■□□□□ 0.77
SLC1A1P43005 AC131212.4-201ENST00000623606 975 ntBASIC19.87■□□□□ 0.77
SLC1A1P43005 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
SLC1A1P43005 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.87■□□□□ 0.77
SLC1A1P43005 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.87■□□□□ 0.77
SLC1A1P43005 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.87■□□□□ 0.77
SLC1A1P43005 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms