Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDKN2CP42773 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDKN2CP42773 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CDKN2CP42773 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDKN2CP42773 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.98■□□□□ 0.47
CDKN2CP42773 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDKN2CP42773 TSPY23P-201ENST00000440136 739 ntBASIC17.98■□□□□ 0.47
CDKN2CP42773 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDKN2CP42773 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.98■□□□□ 0.47
CDKN2CP42773 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.98■□□□□ 0.47
CDKN2CP42773 C1QL1P1-201ENST00000568105 661 ntBASIC17.98■□□□□ 0.47
CDKN2CP42773 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.98■□□□□ 0.47
CDKN2CP42773 NBPF21P-201ENST00000425093 1451 ntBASIC17.98■□□□□ 0.47
CDKN2CP42773 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDKN2CP42773 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDKN2CP42773 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.98■□□□□ 0.47
CDKN2CP42773 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CDKN2CP42773 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDKN2CP42773 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CDKN2CP42773 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDKN2CP42773 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.98■□□□□ 0.47
CDKN2CP42773 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDKN2CP42773 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDKN2CP42773 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
CDKN2CP42773 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2CP42773 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.97■□□□□ 0.47
CDKN2CP42773 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.97■□□□□ 0.47
CDKN2CP42773 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CDKN2CP42773 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.97■□□□□ 0.47
CDKN2CP42773 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.97■□□□□ 0.47
CDKN2CP42773 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CDKN2CP42773 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2CP42773 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2CP42773 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2CP42773 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2CP42773 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2CP42773 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.97■□□□□ 0.47
CDKN2CP42773 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.97■□□□□ 0.47
CDKN2CP42773 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2CP42773 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.97■□□□□ 0.47
CDKN2CP42773 AC090192.1-201ENST00000517740 490 ntBASIC17.97■□□□□ 0.47
CDKN2CP42773 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2CP42773 AL160286.2-201ENST00000567150 934 ntBASIC17.97■□□□□ 0.47
CDKN2CP42773 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CDKN2CP42773 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2CP42773 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2CP42773 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2CP42773 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2CP42773 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.97■□□□□ 0.47
CDKN2CP42773 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2CP42773 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2CP42773 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2CP42773 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2CP42773 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2CP42773 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDKN2CP42773 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.96■□□□□ 0.47
CDKN2CP42773 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDKN2CP42773 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.96■□□□□ 0.47
CDKN2CP42773 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDKN2CP42773 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDKN2CP42773 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDKN2CP42773 AC018470.1-201ENST00000624790 3129 ntBASIC17.96■□□□□ 0.47
CDKN2CP42773 PRKY-204ENST00000533551 1019 ntBASIC17.96■□□□□ 0.47
CDKN2CP42773 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.96■□□□□ 0.47
CDKN2CP42773 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CDKN2CP42773 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDKN2CP42773 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CDKN2CP42773 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDKN2CP42773 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDKN2CP42773 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDKN2CP42773 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CDKN2CP42773 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDKN2CP42773 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CDKN2CP42773 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CDKN2CP42773 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDKN2CP42773 BICD1-207ENST00000551848 1962 ntBASIC17.95■□□□□ 0.46
CDKN2CP42773 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDKN2CP42773 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDKN2CP42773 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.95■□□□□ 0.46
CDKN2CP42773 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.95■□□□□ 0.46
CDKN2CP42773 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CDKN2CP42773 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDKN2CP42773 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDKN2CP42773 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDKN2CP42773 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.95■□□□□ 0.46
CDKN2CP42773 AL355802.2-201ENST00000402069 882 ntBASIC17.95■□□□□ 0.46
CDKN2CP42773 TSPY21P-201ENST00000433481 731 ntBASIC17.95■□□□□ 0.46
CDKN2CP42773 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDKN2CP42773 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.95■□□□□ 0.46
CDKN2CP42773 AC233263.1-201ENST00000578059 224 ntBASIC17.95■□□□□ 0.46
CDKN2CP42773 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CDKN2CP42773 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDKN2CP42773 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.95■□□□□ 0.46
CDKN2CP42773 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDKN2CP42773 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.95■□□□□ 0.46
CDKN2CP42773 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.95■□□□□ 0.46
CDKN2CP42773 AC020763.4-201ENST00000623414 4170 ntBASIC17.95■□□□□ 0.46
CDKN2CP42773 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDKN2CP42773 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CDKN2CP42773 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms