Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP8P40818 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP8P40818 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP8P40818 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.68■□□□□ 0.9
USP8P40818 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.68■□□□□ 0.9
USP8P40818 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.68■□□□□ 0.9
USP8P40818 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.68■□□□□ 0.9
USP8P40818 TSPY20P-201ENST00000450910 630 ntBASIC20.68■□□□□ 0.9
USP8P40818 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.68■□□□□ 0.9
USP8P40818 C1QBPP2-201ENST00000528754 825 ntBASIC20.68■□□□□ 0.9
USP8P40818 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
USP8P40818 AC124016.1-201ENST00000609552 612 ntBASIC20.68■□□□□ 0.9
USP8P40818 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.68■□□□□ 0.9
USP8P40818 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
USP8P40818 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP8P40818 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP8P40818 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP8P40818 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP8P40818 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP8P40818 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.68■□□□□ 0.9
USP8P40818 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP8P40818 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
USP8P40818 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
USP8P40818 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
USP8P40818 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP8P40818 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP8P40818 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
USP8P40818 AC141586.3-201ENST00000562166 1838 ntBASIC20.67■□□□□ 0.9
USP8P40818 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
USP8P40818 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP8P40818 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.67■□□□□ 0.9
USP8P40818 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.67■□□□□ 0.9
USP8P40818 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP8P40818 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.67■□□□□ 0.9
USP8P40818 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP8P40818 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP8P40818 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
USP8P40818 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP8P40818 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP8P40818 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
USP8P40818 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP8P40818 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP8P40818 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.67■□□□□ 0.9
USP8P40818 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.67■□□□□ 0.9
USP8P40818 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.67■□□□□ 0.9
USP8P40818 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP8P40818 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP8P40818 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.67■□□□□ 0.9
USP8P40818 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.67■□□□□ 0.9
USP8P40818 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.67■□□□□ 0.9
USP8P40818 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP8P40818 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.67■□□□□ 0.9
USP8P40818 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP8P40818 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP8P40818 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.67■□□□□ 0.9
USP8P40818 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP8P40818 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP8P40818 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP8P40818 AL161938.1-201ENST00000569833 2180 ntBASIC20.66■□□□□ 0.9
USP8P40818 AL049812.1-201ENST00000432563 2267 ntBASIC20.66■□□□□ 0.9
USP8P40818 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.66■□□□□ 0.9
USP8P40818 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP8P40818 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
USP8P40818 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.66■□□□□ 0.9
USP8P40818 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.66■□□□□ 0.9
USP8P40818 C1QL1P1-201ENST00000568105 661 ntBASIC20.66■□□□□ 0.9
USP8P40818 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.66■□□□□ 0.9
USP8P40818 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.66■□□□□ 0.9
USP8P40818 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP8P40818 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP8P40818 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP8P40818 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.66■□□□□ 0.9
USP8P40818 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
USP8P40818 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP8P40818 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP8P40818 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
USP8P40818 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
USP8P40818 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP8P40818 HTR7P1-202ENST00000624664 4411 ntBASIC20.66■□□□□ 0.9
USP8P40818 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.66■□□□□ 0.9
USP8P40818 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP8P40818 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP8P40818 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP8P40818 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
USP8P40818 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP8P40818 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP8P40818 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP8P40818 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP8P40818 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP8P40818 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.65■□□□□ 0.9
USP8P40818 KRT16P5-201ENST00000455284 522 ntBASIC20.65■□□□□ 0.9
USP8P40818 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.65■□□□□ 0.9
USP8P40818 AC110285.5-201ENST00000611501 352 ntBASIC20.65■□□□□ 0.9
USP8P40818 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP8P40818 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP8P40818 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP8P40818 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP8P40818 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.65■□□□□ 0.9
USP8P40818 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.65■□□□□ 0.9
USP8P40818 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms