Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 AL773604.1-201ENST00000617417 272 ntBASIC19.66■□□□□ 0.74
LTBRP36941 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.66■□□□□ 0.74
LTBRP36941 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.66■□□□□ 0.74
LTBRP36941 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LTBRP36941 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.66■□□□□ 0.74
LTBRP36941 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
LTBRP36941 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LTBRP36941 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LTBRP36941 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LTBRP36941 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
LTBRP36941 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.65■□□□□ 0.74
LTBRP36941 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LTBRP36941 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.65■□□□□ 0.74
LTBRP36941 AC020907.5-201ENST00000624372 1936 ntBASIC19.65■□□□□ 0.74
LTBRP36941 SDHAP1-207ENST00000440850 2000 ntBASIC19.65■□□□□ 0.74
LTBRP36941 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LTBRP36941 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LTBRP36941 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LTBRP36941 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LTBRP36941 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.65■□□□□ 0.74
LTBRP36941 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.65■□□□□ 0.74
LTBRP36941 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.65■□□□□ 0.74
LTBRP36941 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.65■□□□□ 0.74
LTBRP36941 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.65■□□□□ 0.74
LTBRP36941 AC092865.5-201ENST00000545435 363 ntBASIC19.65■□□□□ 0.74
LTBRP36941 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.65■□□□□ 0.74
LTBRP36941 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LTBRP36941 AP005901.3-202ENST00000581653 237 ntBASIC19.65■□□□□ 0.74
LTBRP36941 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.65■□□□□ 0.74
LTBRP36941 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.65■□□□□ 0.74
LTBRP36941 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LTBRP36941 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.65■□□□□ 0.74
LTBRP36941 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LTBRP36941 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.65■□□□□ 0.74
LTBRP36941 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LTBRP36941 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.65■□□□□ 0.74
LTBRP36941 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.65■□□□□ 0.74
LTBRP36941 KRT8P3-201ENST00000519669 1449 ntBASIC19.65■□□□□ 0.74
LTBRP36941 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LTBRP36941 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LTBRP36941 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.65■□□□□ 0.74
LTBRP36941 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LTBRP36941 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LTBRP36941 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
LTBRP36941 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LTBRP36941 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LTBRP36941 MIR1233-2-201ENST00000408138 82 ntBASIC19.64■□□□□ 0.73
LTBRP36941 MIR1233-1-201ENST00000408722 82 ntBASIC19.64■□□□□ 0.73
LTBRP36941 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
LTBRP36941 RN7SL606P-201ENST00000472779 293 ntBASIC19.64■□□□□ 0.73
LTBRP36941 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
LTBRP36941 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.64■□□□□ 0.73
LTBRP36941 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LTBRP36941 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.64■□□□□ 0.73
LTBRP36941 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.64■□□□□ 0.73
LTBRP36941 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LTBRP36941 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
LTBRP36941 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LTBRP36941 NSUN5P1-202ENST00000421140 1535 ntBASIC19.64■□□□□ 0.73
LTBRP36941 NSUN5P2-203ENST00000457352 1529 ntBASIC19.64■□□□□ 0.73
LTBRP36941 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.64■□□□□ 0.73
LTBRP36941 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
LTBRP36941 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LTBRP36941 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LTBRP36941 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
LTBRP36941 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LTBRP36941 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LTBRP36941 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LTBRP36941 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LTBRP36941 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.63■□□□□ 0.73
LTBRP36941 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
LTBRP36941 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LTBRP36941 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LTBRP36941 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.63■□□□□ 0.73
LTBRP36941 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LTBRP36941 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LTBRP36941 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LTBRP36941 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LTBRP36941 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LTBRP36941 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
LTBRP36941 FAM197Y8-203ENST00000450145 560 ntBASIC19.63■□□□□ 0.73
LTBRP36941 POLD2P1-201ENST00000511220 997 ntBASIC19.63■□□□□ 0.73
LTBRP36941 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.63■□□□□ 0.73
LTBRP36941 AC104390.1-201ENST00000555663 520 ntBASIC19.63■□□□□ 0.73
LTBRP36941 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.63■□□□□ 0.73
LTBRP36941 AC010240.3-201ENST00000607688 395 ntBASIC19.63■□□□□ 0.73
LTBRP36941 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.63■□□□□ 0.73
LTBRP36941 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LTBRP36941 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LTBRP36941 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
LTBRP36941 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LTBRP36941 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LTBRP36941 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LTBRP36941 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LTBRP36941 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LTBRP36941 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LTBRP36941 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LTBRP36941 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LTBRP36941 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LTBRP36941 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms