Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC23.9■■□□□ 1.42
RFC4P35249 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC23.9■■□□□ 1.42
RFC4P35249 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
RFC4P35249 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC23.9■■□□□ 1.42
RFC4P35249 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RFC4P35249 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RFC4P35249 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC23.9■■□□□ 1.42
RFC4P35249 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RFC4P35249 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
RFC4P35249 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
RFC4P35249 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RFC4P35249 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
RFC4P35249 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RFC4P35249 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC23.89■■□□□ 1.41
RFC4P35249 AC079776.4-201ENST00000511039 504 ntBASIC23.89■■□□□ 1.41
RFC4P35249 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC23.89■■□□□ 1.41
RFC4P35249 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC23.89■■□□□ 1.41
RFC4P35249 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
RFC4P35249 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
RFC4P35249 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC23.89■■□□□ 1.41
RFC4P35249 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
RFC4P35249 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RFC4P35249 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RFC4P35249 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
RFC4P35249 GOLGA6L5P-202ENST00000515341 1828 ntBASIC23.89■■□□□ 1.41
RFC4P35249 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RFC4P35249 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC23.88■■□□□ 1.41
RFC4P35249 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
RFC4P35249 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
RFC4P35249 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RFC4P35249 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC23.88■■□□□ 1.41
RFC4P35249 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
RFC4P35249 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
RFC4P35249 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC23.88■■□□□ 1.41
RFC4P35249 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
RFC4P35249 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC23.88■■□□□ 1.41
RFC4P35249 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC23.88■■□□□ 1.41
RFC4P35249 AP002469.2-201ENST00000531724 424 ntBASIC23.88■■□□□ 1.41
RFC4P35249 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC23.88■■□□□ 1.41
RFC4P35249 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RFC4P35249 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RFC4P35249 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC23.87■■□□□ 1.41
RFC4P35249 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RFC4P35249 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RFC4P35249 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RFC4P35249 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RFC4P35249 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RFC4P35249 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RFC4P35249 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RFC4P35249 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC23.87■■□□□ 1.41
RFC4P35249 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC23.87■■□□□ 1.41
RFC4P35249 AC106795.1-205ENST00000512851 1056 ntBASIC23.87■■□□□ 1.41
RFC4P35249 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RFC4P35249 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC23.87■■□□□ 1.41
RFC4P35249 SLC25A6P4-201ENST00000586535 553 ntBASIC23.87■■□□□ 1.41
RFC4P35249 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC23.87■■□□□ 1.41
RFC4P35249 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RFC4P35249 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RFC4P35249 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RFC4P35249 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
RFC4P35249 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
RFC4P35249 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC23.87■■□□□ 1.41
RFC4P35249 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RFC4P35249 GAS2L1P1-201ENST00000420145 1480 ntBASIC23.87■■□□□ 1.41
RFC4P35249 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RFC4P35249 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC23.86■■□□□ 1.41
RFC4P35249 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
RFC4P35249 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.86■■□□□ 1.41
RFC4P35249 AL162377.1-201ENST00000618844 1793 ntBASIC23.86■■□□□ 1.41
RFC4P35249 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RFC4P35249 Z83836.1-201ENST00000624605 1642 ntBASIC23.86■■□□□ 1.41
RFC4P35249 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RFC4P35249 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RFC4P35249 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RFC4P35249 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
RFC4P35249 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC23.86■■□□□ 1.41
RFC4P35249 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC23.86■■□□□ 1.41
RFC4P35249 AC104819.1-201ENST00000504587 486 ntBASIC23.86■■□□□ 1.41
RFC4P35249 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC23.86■■□□□ 1.41
RFC4P35249 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RFC4P35249 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
RFC4P35249 BMF-207ENST00000559701 630 ntTSL 3 BASIC23.86■■□□□ 1.41
RFC4P35249 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
RFC4P35249 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
RFC4P35249 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC23.86■■□□□ 1.41
RFC4P35249 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
RFC4P35249 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC23.85■■□□□ 1.41
RFC4P35249 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RFC4P35249 KRT8P3-201ENST00000519669 1449 ntBASIC23.85■■□□□ 1.41
RFC4P35249 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RFC4P35249 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RFC4P35249 BAALC-202ENST00000306391 243 ntTSL 5 BASIC23.85■■□□□ 1.41
RFC4P35249 BAALC-204ENST00000330955 222 ntTSL 5 BASIC23.85■■□□□ 1.41
RFC4P35249 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RFC4P35249 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC23.85■■□□□ 1.41
RFC4P35249 AL662844.1-201ENST00000546340 181 ntBASIC23.85■■□□□ 1.41
RFC4P35249 LITAF-220ENST00000620789 692 ntTSL 5 BASIC23.85■■□□□ 1.41
RFC4P35249 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC23.85■■□□□ 1.41
RFC4P35249 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RFC4P35249 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms