Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
CHRNA3P32297 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA3P32297 AC012618.2-201ENST00000428058 849 ntBASIC20.03■□□□□ 0.8
CHRNA3P32297 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CHRNA3P32297 AC107956.1-201ENST00000494359 873 ntBASIC20.03■□□□□ 0.8
CHRNA3P32297 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA3P32297 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CHRNA3P32297 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA3P32297 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.03■□□□□ 0.8
CHRNA3P32297 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CHRNA3P32297 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA3P32297 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.03■□□□□ 0.8
CHRNA3P32297 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA3P32297 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.03■□□□□ 0.8
CHRNA3P32297 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA3P32297 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA3P32297 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA3P32297 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.02■□□□□ 0.8
CHRNA3P32297 AC005082.1-201ENST00000413042 2259 ntBASIC20.02■□□□□ 0.8
CHRNA3P32297 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA3P32297 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CHRNA3P32297 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA3P32297 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
CHRNA3P32297 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA3P32297 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA3P32297 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA3P32297 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA3P32297 SDHAP1-207ENST00000440850 2000 ntBASIC20.02■□□□□ 0.8
CHRNA3P32297 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA3P32297 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CHRNA3P32297 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA3P32297 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CHRNA3P32297 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA3P32297 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA3P32297 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.02■□□□□ 0.8
CHRNA3P32297 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA3P32297 KRT16P5-201ENST00000455284 522 ntBASIC20.02■□□□□ 0.8
CHRNA3P32297 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.02■□□□□ 0.8
CHRNA3P32297 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.02■□□□□ 0.8
CHRNA3P32297 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.02■□□□□ 0.8
CHRNA3P32297 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CHRNA3P32297 RARRES2P10-201ENST00000564312 460 ntBASIC20.02■□□□□ 0.8
CHRNA3P32297 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.02■□□□□ 0.8
CHRNA3P32297 AC233702.5-201ENST00000584107 538 ntBASIC20.02■□□□□ 0.8
CHRNA3P32297 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.02■□□□□ 0.8
CHRNA3P32297 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.02■□□□□ 0.8
CHRNA3P32297 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA3P32297 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA3P32297 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.02■□□□□ 0.8
CHRNA3P32297 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.02■□□□□ 0.8
CHRNA3P32297 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA3P32297 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA3P32297 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA3P32297 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA3P32297 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.02■□□□□ 0.8
CHRNA3P32297 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA3P32297 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHRNA3P32297 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHRNA3P32297 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHRNA3P32297 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CHRNA3P32297 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CHRNA3P32297 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHRNA3P32297 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHRNA3P32297 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHRNA3P32297 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHRNA3P32297 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHRNA3P32297 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
CHRNA3P32297 AL135905.2-201ENST00000584934 1404 ntBASIC20.02■□□□□ 0.79
CHRNA3P32297 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA3P32297 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA3P32297 WIZP1-201ENST00000531444 2299 ntBASIC20.01■□□□□ 0.79
CHRNA3P32297 FP475955.4-201ENST00000623131 1990 ntBASIC20.01■□□□□ 0.79
CHRNA3P32297 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.01■□□□□ 0.79
CHRNA3P32297 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA3P32297 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA3P32297 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA3P32297 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA3P32297 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.01■□□□□ 0.79
CHRNA3P32297 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.01■□□□□ 0.79
CHRNA3P32297 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA3P32297 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.01■□□□□ 0.79
CHRNA3P32297 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA3P32297 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA3P32297 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.01■□□□□ 0.79
CHRNA3P32297 AC090164.3-201ENST00000610780 2143 ntBASIC20.01■□□□□ 0.79
CHRNA3P32297 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA3P32297 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.01■□□□□ 0.79
CHRNA3P32297 IRX1P1-201ENST00000438849 1838 ntBASIC20.01■□□□□ 0.79
CHRNA3P32297 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA3P32297 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
CHRNA3P32297 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.01■□□□□ 0.79
CHRNA3P32297 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA3P32297 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.01■□□□□ 0.79
CHRNA3P32297 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA3P32297 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CHRNA3P32297 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHRNA3P32297 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHRNA3P32297 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20■□□□□ 0.79
CHRNA3P32297 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20■□□□□ 0.79
CHRNA3P32297 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms