Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.76■□□□□ 0.91
HOXC8P31273 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.76■□□□□ 0.91
HOXC8P31273 AC092119.3-201ENST00000612618 583 ntBASIC20.76■□□□□ 0.91
HOXC8P31273 AC012313.10-201ENST00000623509 926 ntBASIC20.76■□□□□ 0.91
HOXC8P31273 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
HOXC8P31273 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.76■□□□□ 0.91
HOXC8P31273 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXC8P31273 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.76■□□□□ 0.91
HOXC8P31273 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.76■□□□□ 0.91
HOXC8P31273 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXC8P31273 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.76■□□□□ 0.91
HOXC8P31273 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.76■□□□□ 0.91
HOXC8P31273 AC093525.10-201ENST00000625130 1569 ntBASIC20.76■□□□□ 0.91
HOXC8P31273 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXC8P31273 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC8P31273 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.75■□□□□ 0.91
HOXC8P31273 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.75■□□□□ 0.91
HOXC8P31273 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC8P31273 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.75■□□□□ 0.91
HOXC8P31273 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC8P31273 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC8P31273 TSSC2-201ENST00000450217 709 ntBASIC20.75■□□□□ 0.91
HOXC8P31273 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC8P31273 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.75■□□□□ 0.91
HOXC8P31273 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC8P31273 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC8P31273 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC8P31273 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC8P31273 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC8P31273 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.75■□□□□ 0.91
HOXC8P31273 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC8P31273 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC8P31273 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.74■□□□□ 0.91
HOXC8P31273 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC8P31273 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC8P31273 AL391807.1-203ENST00000604392 2365 ntBASIC20.74■□□□□ 0.91
HOXC8P31273 RCC2P3-201ENST00000418112 1537 ntBASIC20.74■□□□□ 0.91
HOXC8P31273 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC8P31273 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC8P31273 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
HOXC8P31273 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC8P31273 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC8P31273 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.74■□□□□ 0.91
HOXC8P31273 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.74■□□□□ 0.91
HOXC8P31273 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
HOXC8P31273 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC8P31273 AL136038.4-201ENST00000603606 1261 ntBASIC20.74■□□□□ 0.91
HOXC8P31273 AL121672.3-201ENST00000608644 468 ntBASIC20.74■□□□□ 0.91
HOXC8P31273 AC008556.1-201ENST00000610908 2040 ntBASIC20.74■□□□□ 0.91
HOXC8P31273 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.74■□□□□ 0.91
HOXC8P31273 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.74■□□□□ 0.91
HOXC8P31273 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.74■□□□□ 0.91
HOXC8P31273 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC8P31273 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
HOXC8P31273 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.74■□□□□ 0.91
HOXC8P31273 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC8P31273 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC8P31273 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC8P31273 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC8P31273 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.73■□□□□ 0.91
HOXC8P31273 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.73■□□□□ 0.91
HOXC8P31273 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC8P31273 CLDN5-201ENST00000403084 2357 ntBASIC20.73■□□□□ 0.91
HOXC8P31273 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC8P31273 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.73■□□□□ 0.91
HOXC8P31273 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC8P31273 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
HOXC8P31273 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC8P31273 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC8P31273 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC8P31273 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.73■□□□□ 0.91
HOXC8P31273 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC8P31273 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.73■□□□□ 0.91
HOXC8P31273 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.73■□□□□ 0.91
HOXC8P31273 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.73■□□□□ 0.91
HOXC8P31273 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
HOXC8P31273 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC8P31273 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.73■□□□□ 0.91
HOXC8P31273 AC104390.1-201ENST00000555663 520 ntBASIC20.73■□□□□ 0.91
HOXC8P31273 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.73■□□□□ 0.91
HOXC8P31273 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.73■□□□□ 0.91
HOXC8P31273 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.73■□□□□ 0.91
HOXC8P31273 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC8P31273 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.73■□□□□ 0.91
HOXC8P31273 KRT8P32-201ENST00000512863 1461 ntBASIC20.73■□□□□ 0.91
HOXC8P31273 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC8P31273 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
HOXC8P31273 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC8P31273 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC8P31273 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC8P31273 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.72■□□□□ 0.91
HOXC8P31273 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC8P31273 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
HOXC8P31273 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC8P31273 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC8P31273 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC8P31273 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC8P31273 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.72■□□□□ 0.91
HOXC8P31273 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.72■□□□□ 0.91
HOXC8P31273 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms