Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
TNFRSF1BP20333 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF1BP20333 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TNFRSF1BP20333 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF1BP20333 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
TNFRSF1BP20333 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF1BP20333 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TNFRSF1BP20333 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF1BP20333 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.66■□□□□ 0.42
TNFRSF1BP20333 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TNFRSF1BP20333 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.66■□□□□ 0.42
TNFRSF1BP20333 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
TNFRSF1BP20333 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.66■□□□□ 0.42
TNFRSF1BP20333 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TNFRSF1BP20333 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TNFRSF1BP20333 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF1BP20333 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TNFRSF1BP20333 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF1BP20333 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TNFRSF1BP20333 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.66■□□□□ 0.42
TNFRSF1BP20333 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF1BP20333 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF1BP20333 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFRSF1BP20333 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.65■□□□□ 0.42
TNFRSF1BP20333 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TNFRSF1BP20333 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFRSF1BP20333 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TNFRSF1BP20333 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.65■□□□□ 0.42
TNFRSF1BP20333 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.65■□□□□ 0.42
TNFRSF1BP20333 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.65■□□□□ 0.42
TNFRSF1BP20333 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFRSF1BP20333 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TNFRSF1BP20333 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TNFRSF1BP20333 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFRSF1BP20333 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFRSF1BP20333 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TNFRSF1BP20333 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.65■□□□□ 0.42
TNFRSF1BP20333 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
TNFRSF1BP20333 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.65■□□□□ 0.42
TNFRSF1BP20333 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.65■□□□□ 0.42
TNFRSF1BP20333 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TNFRSF1BP20333 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.65■□□□□ 0.42
TNFRSF1BP20333 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TNFRSF1BP20333 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TNFRSF1BP20333 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
TNFRSF1BP20333 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TNFRSF1BP20333 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.65■□□□□ 0.42
TNFRSF1BP20333 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TNFRSF1BP20333 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TNFRSF1BP20333 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFRSF1BP20333 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFRSF1BP20333 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFRSF1BP20333 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
TNFRSF1BP20333 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TNFRSF1BP20333 BICD1-207ENST00000551848 1962 ntBASIC17.64■□□□□ 0.41
TNFRSF1BP20333 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFRSF1BP20333 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TNFRSF1BP20333 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.64■□□□□ 0.41
TNFRSF1BP20333 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFRSF1BP20333 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TNFRSF1BP20333 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.64■□□□□ 0.41
TNFRSF1BP20333 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
TNFRSF1BP20333 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.64■□□□□ 0.41
TNFRSF1BP20333 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.64■□□□□ 0.41
TNFRSF1BP20333 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
TNFRSF1BP20333 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFRSF1BP20333 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TNFRSF1BP20333 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFRSF1BP20333 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TNFRSF1BP20333 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFRSF1BP20333 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TNFRSF1BP20333 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TNFRSF1BP20333 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TNFRSF1BP20333 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TNFRSF1BP20333 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.64■□□□□ 0.41
TNFRSF1BP20333 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFRSF1BP20333 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TNFRSF1BP20333 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TNFRSF1BP20333 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFRSF1BP20333 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.63■□□□□ 0.41
TNFRSF1BP20333 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.63■□□□□ 0.41
TNFRSF1BP20333 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.63■□□□□ 0.41
TNFRSF1BP20333 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.63■□□□□ 0.41
TNFRSF1BP20333 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF1BP20333 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.63■□□□□ 0.41
TNFRSF1BP20333 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF1BP20333 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF1BP20333 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TNFRSF1BP20333 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TNFRSF1BP20333 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms