Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT4P19013 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT4P19013 ABALON-201ENST00000629058 1903 ntBASIC19.08■□□□□ 0.64
KRT4P19013 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.07■□□□□ 0.64
KRT4P19013 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KRT4P19013 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.07■□□□□ 0.64
KRT4P19013 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT4P19013 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.07■□□□□ 0.64
KRT4P19013 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT4P19013 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.07■□□□□ 0.64
KRT4P19013 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT4P19013 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT4P19013 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KRT4P19013 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
KRT4P19013 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT4P19013 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT4P19013 MKRN4P-201ENST00000444706 1521 ntBASIC19.07■□□□□ 0.64
KRT4P19013 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.07■□□□□ 0.64
KRT4P19013 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.07■□□□□ 0.64
KRT4P19013 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT4P19013 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT4P19013 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KRT4P19013 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT4P19013 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.07■□□□□ 0.64
KRT4P19013 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KRT4P19013 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KRT4P19013 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.07■□□□□ 0.64
KRT4P19013 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.07■□□□□ 0.64
KRT4P19013 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KRT4P19013 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KRT4P19013 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT4P19013 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
KRT4P19013 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KRT4P19013 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT4P19013 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.07■□□□□ 0.64
KRT4P19013 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
KRT4P19013 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT4P19013 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.07■□□□□ 0.64
KRT4P19013 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT4P19013 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT4P19013 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT4P19013 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT4P19013 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT4P19013 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.06■□□□□ 0.64
KRT4P19013 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT4P19013 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT4P19013 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.06■□□□□ 0.64
KRT4P19013 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT4P19013 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT4P19013 BX276092.2-201ENST00000417668 665 ntBASIC19.06■□□□□ 0.64
KRT4P19013 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.06■□□□□ 0.64
KRT4P19013 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
KRT4P19013 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT4P19013 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
KRT4P19013 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT4P19013 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT4P19013 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT4P19013 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT4P19013 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT4P19013 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.06■□□□□ 0.64
KRT4P19013 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
KRT4P19013 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
KRT4P19013 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT4P19013 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
KRT4P19013 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.06■□□□□ 0.64
KRT4P19013 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT4P19013 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT4P19013 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
KRT4P19013 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
KRT4P19013 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
KRT4P19013 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.05■□□□□ 0.64
KRT4P19013 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
KRT4P19013 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT4P19013 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
KRT4P19013 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.05■□□□□ 0.64
KRT4P19013 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT4P19013 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRT4P19013 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRT4P19013 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT4P19013 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
KRT4P19013 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.05■□□□□ 0.64
KRT4P19013 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
KRT4P19013 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT4P19013 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
KRT4P19013 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.05■□□□□ 0.64
KRT4P19013 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.05■□□□□ 0.64
KRT4P19013 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT4P19013 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT4P19013 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT4P19013 FZD10-202ENST00000539839 3282 ntBASIC19.05■□□□□ 0.64
KRT4P19013 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT4P19013 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT4P19013 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT4P19013 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT4P19013 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRT4P19013 AP000997.3-201ENST00000623333 2250 ntBASIC19.04■□□□□ 0.64
KRT4P19013 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
KRT4P19013 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
KRT4P19013 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.04■□□□□ 0.64
KRT4P19013 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms