Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
COL11A2P13942 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.28■■□□□ 1.32
COL11A2P13942 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL11A2P13942 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL11A2P13942 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
COL11A2P13942 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL11A2P13942 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC23.28■■□□□ 1.32
COL11A2P13942 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
COL11A2P13942 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC23.28■■□□□ 1.32
COL11A2P13942 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC23.28■■□□□ 1.32
COL11A2P13942 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL11A2P13942 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
COL11A2P13942 AC099778.1-201ENST00000568593 1911 ntBASIC23.27■■□□□ 1.32
COL11A2P13942 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL11A2P13942 HOXB1-202ENST00000577092 1414 ntBASIC23.27■■□□□ 1.32
COL11A2P13942 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
COL11A2P13942 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC23.27■■□□□ 1.32
COL11A2P13942 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL11A2P13942 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL11A2P13942 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL11A2P13942 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
COL11A2P13942 ELP6-205ENST00000439305 880 ntTSL 2 BASIC23.27■■□□□ 1.32
COL11A2P13942 SAPCD2P3-201ENST00000455031 850 ntBASIC23.27■■□□□ 1.32
COL11A2P13942 AC091607.1-201ENST00000490318 1060 ntBASIC23.27■■□□□ 1.32
COL11A2P13942 AC091304.2-201ENST00000564639 760 ntBASIC23.27■■□□□ 1.32
COL11A2P13942 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC23.27■■□□□ 1.32
COL11A2P13942 AP005901.3-202ENST00000581653 237 ntBASIC23.27■■□□□ 1.32
COL11A2P13942 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL11A2P13942 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL11A2P13942 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.31
COL11A2P13942 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL11A2P13942 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC23.26■■□□□ 1.31
COL11A2P13942 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL11A2P13942 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
COL11A2P13942 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
COL11A2P13942 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL11A2P13942 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
COL11A2P13942 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL11A2P13942 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC23.26■■□□□ 1.31
COL11A2P13942 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC23.26■■□□□ 1.31
COL11A2P13942 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL11A2P13942 REXO1L6P-202ENST00000619970 1078 ntBASIC23.26■■□□□ 1.31
COL11A2P13942 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
COL11A2P13942 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC23.26■■□□□ 1.31
COL11A2P13942 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
COL11A2P13942 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
COL11A2P13942 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
COL11A2P13942 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
COL11A2P13942 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
COL11A2P13942 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL11A2P13942 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL11A2P13942 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC23.25■■□□□ 1.31
COL11A2P13942 AL353801.3-201ENST00000609898 542 ntBASIC23.25■■□□□ 1.31
COL11A2P13942 MIR7706-201ENST00000613747 67 ntBASIC23.25■■□□□ 1.31
COL11A2P13942 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC23.25■■□□□ 1.31
COL11A2P13942 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC23.25■■□□□ 1.31
COL11A2P13942 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC23.25■■□□□ 1.31
COL11A2P13942 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
COL11A2P13942 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC23.25■■□□□ 1.31
COL11A2P13942 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC23.25■■□□□ 1.31
COL11A2P13942 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL11A2P13942 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
COL11A2P13942 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL11A2P13942 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL11A2P13942 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC23.25■■□□□ 1.31
COL11A2P13942 CDV3-207ENST00000508481 661 ntTSL 3 BASIC23.25■■□□□ 1.31
COL11A2P13942 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL11A2P13942 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC23.25■■□□□ 1.31
COL11A2P13942 SLC25A1P1-201ENST00000528351 927 ntBASIC23.25■■□□□ 1.31
COL11A2P13942 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC23.25■■□□□ 1.31
COL11A2P13942 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC23.25■■□□□ 1.31
COL11A2P13942 GABARAPL3-202ENST00000624044 1851 ntBASIC23.25■■□□□ 1.31
COL11A2P13942 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL11A2P13942 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC23.24■■□□□ 1.31
COL11A2P13942 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL11A2P13942 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL11A2P13942 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
COL11A2P13942 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC23.24■■□□□ 1.31
COL11A2P13942 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL11A2P13942 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
COL11A2P13942 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC23.24■■□□□ 1.31
COL11A2P13942 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL11A2P13942 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
COL11A2P13942 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL11A2P13942 AC104390.1-201ENST00000555663 520 ntBASIC23.24■■□□□ 1.31
COL11A2P13942 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
COL11A2P13942 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC23.24■■□□□ 1.31
COL11A2P13942 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL11A2P13942 VPS51-217ENST00000639871 243 ntTSL 5 BASIC23.24■■□□□ 1.31
COL11A2P13942 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL11A2P13942 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
COL11A2P13942 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL11A2P13942 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.23■■□□□ 1.31
COL11A2P13942 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL11A2P13942 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
COL11A2P13942 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL11A2P13942 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC23.23■■□□□ 1.31
COL11A2P13942 KRT18P23-201ENST00000435622 1283 ntBASIC23.23■■□□□ 1.31
COL11A2P13942 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC23.23■■□□□ 1.31
COL11A2P13942 AC079776.4-201ENST00000511039 504 ntBASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms