Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.57■□□□□ 0.4
UBL4AP11441 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.57■□□□□ 0.4
UBL4AP11441 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBL4AP11441 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBL4AP11441 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBL4AP11441 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBL4AP11441 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBL4AP11441 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
UBL4AP11441 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBL4AP11441 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBL4AP11441 KRT16P1-201ENST00000399124 1418 ntBASIC17.56■□□□□ 0.4
UBL4AP11441 AL135905.2-201ENST00000584934 1404 ntBASIC17.56■□□□□ 0.4
UBL4AP11441 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBL4AP11441 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBL4AP11441 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.56■□□□□ 0.4
UBL4AP11441 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBL4AP11441 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBL4AP11441 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBL4AP11441 TSPY21P-201ENST00000433481 731 ntBASIC17.56■□□□□ 0.4
UBL4AP11441 UBE2SP1-201ENST00000450587 669 ntBASIC17.56■□□□□ 0.4
UBL4AP11441 RPS2P4-201ENST00000476944 856 ntBASIC17.56■□□□□ 0.4
UBL4AP11441 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.56■□□□□ 0.4
UBL4AP11441 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.56■□□□□ 0.4
UBL4AP11441 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.56■□□□□ 0.4
UBL4AP11441 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.56■□□□□ 0.4
UBL4AP11441 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
UBL4AP11441 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBL4AP11441 AL356309.3-201ENST00000624132 1934 ntBASIC17.56■□□□□ 0.4
UBL4AP11441 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
UBL4AP11441 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBL4AP11441 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBL4AP11441 AL161938.1-201ENST00000569833 2180 ntBASIC17.56■□□□□ 0.4
UBL4AP11441 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.56■□□□□ 0.4
UBL4AP11441 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBL4AP11441 AL139384.1-201ENST00000612143 3047 ntBASIC17.56■□□□□ 0.4
UBL4AP11441 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBL4AP11441 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBL4AP11441 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.55■□□□□ 0.4
UBL4AP11441 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBL4AP11441 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.55■□□□□ 0.4
UBL4AP11441 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.55■□□□□ 0.4
UBL4AP11441 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBL4AP11441 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBL4AP11441 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
UBL4AP11441 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.55■□□□□ 0.4
UBL4AP11441 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBL4AP11441 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBL4AP11441 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
UBL4AP11441 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
UBL4AP11441 AC004980.1-204ENST00000429707 299 ntBASIC17.55■□□□□ 0.4
UBL4AP11441 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.55■□□□□ 0.4
UBL4AP11441 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.55■□□□□ 0.4
UBL4AP11441 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
UBL4AP11441 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.55■□□□□ 0.4
UBL4AP11441 Z85996.1-201ENST00000494644 937 ntBASIC17.55■□□□□ 0.4
UBL4AP11441 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.55■□□□□ 0.4
UBL4AP11441 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.55■□□□□ 0.4
UBL4AP11441 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.55■□□□□ 0.4
UBL4AP11441 AC073195.1-201ENST00000607241 877 ntBASIC17.55■□□□□ 0.4
UBL4AP11441 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBL4AP11441 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
UBL4AP11441 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBL4AP11441 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBL4AP11441 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBL4AP11441 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.55■□□□□ 0.4
UBL4AP11441 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBL4AP11441 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBL4AP11441 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBL4AP11441 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBL4AP11441 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.54■□□□□ 0.4
UBL4AP11441 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
UBL4AP11441 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBL4AP11441 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.54■□□□□ 0.4
UBL4AP11441 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBL4AP11441 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBL4AP11441 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBL4AP11441 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBL4AP11441 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBL4AP11441 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBL4AP11441 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
UBL4AP11441 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBL4AP11441 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.54■□□□□ 0.4
UBL4AP11441 CR392000.1-201ENST00000624770 1228 ntBASIC17.54■□□□□ 0.4
UBL4AP11441 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.54■□□□□ 0.4
UBL4AP11441 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBL4AP11441 AP000974.1-201ENST00000623909 2387 ntBASIC17.54■□□□□ 0.4
UBL4AP11441 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBL4AP11441 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBL4AP11441 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
UBL4AP11441 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBL4AP11441 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
UBL4AP11441 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.54■□□□□ 0.4
UBL4AP11441 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBL4AP11441 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBL4AP11441 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
UBL4AP11441 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
UBL4AP11441 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.53■□□□□ 0.4
UBL4AP11441 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBL4AP11441 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.53■□□□□ 0.4
UBL4AP11441 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms