Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.86□□□□□ -0.03
CD28P10747 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CD28P10747 USP39-204ENST00000409766 2033 ntTSL 2 BASIC14.86□□□□□ -0.03
CD28P10747 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CD28P10747 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD28P10747 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD28P10747 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD28P10747 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD28P10747 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CD28P10747 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CD28P10747 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD28P10747 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CD28P10747 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC14.86□□□□□ -0.03
CD28P10747 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC14.86□□□□□ -0.03
CD28P10747 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC14.86□□□□□ -0.03
CD28P10747 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD28P10747 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
CD28P10747 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CD28P10747 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC14.85□□□□□ -0.03
CD28P10747 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD28P10747 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD28P10747 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD28P10747 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD28P10747 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CD28P10747 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.85□□□□□ -0.03
CD28P10747 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD28P10747 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD28P10747 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.85□□□□□ -0.03
CD28P10747 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.85□□□□□ -0.03
CD28P10747 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD28P10747 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
CD28P10747 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CD28P10747 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CD28P10747 TCF3P1-201ENST00000423021 1937 ntBASIC14.85□□□□□ -0.03
CD28P10747 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CD28P10747 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD28P10747 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD28P10747 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CD28P10747 AC104417.2-201ENST00000562989 1793 ntBASIC14.85□□□□□ -0.03
CD28P10747 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD28P10747 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD28P10747 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD28P10747 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC14.85□□□□□ -0.03
CD28P10747 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC14.85□□□□□ -0.03
CD28P10747 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD28P10747 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD28P10747 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD28P10747 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD28P10747 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD28P10747 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD28P10747 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC14.84□□□□□ -0.03
CD28P10747 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CD28P10747 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD28P10747 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC14.84□□□□□ -0.03
CD28P10747 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CD28P10747 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD28P10747 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD28P10747 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD28P10747 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.84□□□□□ -0.03
CD28P10747 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.84□□□□□ -0.03
CD28P10747 HOMER2P1-201ENST00000455653 964 ntBASIC14.84□□□□□ -0.03
CD28P10747 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD28P10747 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.84□□□□□ -0.03
CD28P10747 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC14.84□□□□□ -0.03
CD28P10747 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC14.84□□□□□ -0.03
CD28P10747 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
CD28P10747 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC14.84□□□□□ -0.03
CD28P10747 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CD28P10747 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
CD28P10747 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC14.84□□□□□ -0.03
CD28P10747 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD28P10747 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD28P10747 AC112907.3-201ENST00000577781 2400 ntBASIC14.84□□□□□ -0.03
CD28P10747 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC14.84□□□□□ -0.03
CD28P10747 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.84□□□□□ -0.03
CD28P10747 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.84□□□□□ -0.03
CD28P10747 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CD28P10747 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC14.84□□□□□ -0.03
CD28P10747 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
CD28P10747 ZNF815P-204ENST00000434898 1737 ntBASIC14.83□□□□□ -0.03
CD28P10747 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CD28P10747 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CD28P10747 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
CD28P10747 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CD28P10747 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.83□□□□□ -0.03
CD28P10747 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
CD28P10747 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
CD28P10747 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD28P10747 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD28P10747 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC14.83□□□□□ -0.04
CD28P10747 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC14.83□□□□□ -0.04
CD28P10747 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CD28P10747 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.83□□□□□ -0.04
CD28P10747 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.83□□□□□ -0.04
CD28P10747 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD28P10747 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.83□□□□□ -0.04
CD28P10747 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.83□□□□□ -0.04
CD28P10747 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14.83□□□□□ -0.04
CD28P10747 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.83□□□□□ -0.04
CD28P10747 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms