Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 NKILA-202ENST00000614771 2598 ntBASIC14.76□□□□□ -0.05
CXCL1P09341 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.76□□□□□ -0.05
CXCL1P09341 AC108860.2-201ENST00000562760 2183 ntBASIC14.75□□□□□ -0.05
CXCL1P09341 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CXCL1P09341 BCL2-203ENST00000589955 5011 ntBASIC14.75□□□□□ -0.05
CXCL1P09341 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC14.75□□□□□ -0.05
CXCL1P09341 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC14.75□□□□□ -0.05
CXCL1P09341 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CXCL1P09341 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CXCL1P09341 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CXCL1P09341 AC011676.5-201ENST00000624864 2660 ntBASIC14.75□□□□□ -0.05
CXCL1P09341 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CXCL1P09341 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CXCL1P09341 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CXCL1P09341 MIR939-201ENST00000401314 82 ntBASIC14.75□□□□□ -0.05
CXCL1P09341 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC14.75□□□□□ -0.05
CXCL1P09341 PGM5P4-201ENST00000421970 445 ntBASIC14.75□□□□□ -0.05
CXCL1P09341 AC106739.1-201ENST00000617035 715 ntBASIC14.75□□□□□ -0.05
CXCL1P09341 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CXCL1P09341 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CXCL1P09341 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CXCL1P09341 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CXCL1P09341 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.75□□□□□ -0.05
CXCL1P09341 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CXCL1P09341 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.75□□□□□ -0.05
CXCL1P09341 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CXCL1P09341 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CXCL1P09341 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
CXCL1P09341 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CXCL1P09341 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
CXCL1P09341 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CXCL1P09341 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.75□□□□□ -0.05
CXCL1P09341 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
CXCL1P09341 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CXCL1P09341 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC14.75□□□□□ -0.05
CXCL1P09341 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC14.75□□□□□ -0.05
CXCL1P09341 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CXCL1P09341 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CXCL1P09341 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CXCL1P09341 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CXCL1P09341 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CXCL1P09341 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CXCL1P09341 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CXCL1P09341 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CXCL1P09341 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC14.74□□□□□ -0.05
CXCL1P09341 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.74□□□□□ -0.05
CXCL1P09341 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CXCL1P09341 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CXCL1P09341 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CXCL1P09341 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC14.74□□□□□ -0.05
CXCL1P09341 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CXCL1P09341 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CXCL1P09341 AC097381.1-201ENST00000429019 1296 ntBASIC14.74□□□□□ -0.05
CXCL1P09341 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC14.74□□□□□ -0.05
CXCL1P09341 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.74□□□□□ -0.05
CXCL1P09341 MAG-206ENST00000597035 542 ntTSL 4 BASIC14.74□□□□□ -0.05
CXCL1P09341 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CXCL1P09341 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CXCL1P09341 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC14.74□□□□□ -0.05
CXCL1P09341 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CXCL1P09341 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.74□□□□□ -0.05
CXCL1P09341 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CXCL1P09341 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CXCL1P09341 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CXCL1P09341 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CXCL1P09341 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL1P09341 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CXCL1P09341 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.73□□□□□ -0.05
CXCL1P09341 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL1P09341 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL1P09341 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL1P09341 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL1P09341 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL1P09341 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL1P09341 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL1P09341 AL513477.1-201ENST00000602865 2407 ntBASIC14.73□□□□□ -0.05
CXCL1P09341 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL1P09341 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC14.73□□□□□ -0.05
CXCL1P09341 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL1P09341 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL1P09341 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
CXCL1P09341 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL1P09341 AC091799.1-201ENST00000422823 811 ntBASIC14.73□□□□□ -0.05
CXCL1P09341 PBX2P1-201ENST00000493219 1291 ntBASIC14.73□□□□□ -0.05
CXCL1P09341 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC14.73□□□□□ -0.05
CXCL1P09341 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL1P09341 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.73□□□□□ -0.05
CXCL1P09341 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL1P09341 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.73□□□□□ -0.05
CXCL1P09341 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.73□□□□□ -0.05
CXCL1P09341 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CXCL1P09341 AL596257.1-201ENST00000641463 2694 ntBASIC14.73□□□□□ -0.05
CXCL1P09341 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC14.73□□□□□ -0.05
CXCL1P09341 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL1P09341 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL1P09341 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL1P09341 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL1P09341 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.73□□□□□ -0.05
CXCL1P09341 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CXCL1P09341 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms