Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.37■□□□□ 0.37
P04436 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
P04436 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
P04436 AFG3L1P-217ENST00000557444 2447 ntBASIC17.37■□□□□ 0.37
P04436 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.37■□□□□ 0.37
P04436 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.37■□□□□ 0.37
P04436 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
P04436 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
P04436 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.37■□□□□ 0.37
P04436 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
P04436 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.37■□□□□ 0.37
P04436 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.37■□□□□ 0.37
P04436 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.37■□□□□ 0.37
P04436 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.37■□□□□ 0.37
P04436 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.37■□□□□ 0.37
P04436 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
P04436 AL049597.2-201ENST00000565575 961 ntBASIC17.37■□□□□ 0.37
P04436 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
P04436 AC010331.1-201ENST00000611423 582 ntBASIC17.37■□□□□ 0.37
P04436 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
P04436 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
P04436 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
P04436 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
P04436 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.37■□□□□ 0.37
P04436 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.36■□□□□ 0.37
P04436 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
P04436 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
P04436 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04436 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04436 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04436 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
P04436 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
P04436 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
P04436 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
P04436 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04436 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04436 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04436 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04436 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
P04436 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
P04436 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
P04436 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.36■□□□□ 0.37
P04436 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04436 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
P04436 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04436 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04436 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
P04436 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04436 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
P04436 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04436 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04436 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
P04436 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.36■□□□□ 0.37
P04436 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04436 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
P04436 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04436 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.35■□□□□ 0.37
P04436 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04436 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.35■□□□□ 0.37
P04436 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
P04436 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04436 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.35■□□□□ 0.37
P04436 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04436 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04436 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04436 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
P04436 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04436 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04436 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04436 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.35■□□□□ 0.37
P04436 BX664615.1-201ENST00000443558 458 ntBASIC17.35■□□□□ 0.37
P04436 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04436 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.35■□□□□ 0.37
P04436 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04436 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.35■□□□□ 0.37
P04436 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.35■□□□□ 0.37
P04436 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
P04436 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
P04436 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04436 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
P04436 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.35■□□□□ 0.37
P04436 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
P04436 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
P04436 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
P04436 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
P04436 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
P04436 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
P04436 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
P04436 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
P04436 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.34■□□□□ 0.37
P04436 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
P04436 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.34■□□□□ 0.37
P04436 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.34■□□□□ 0.37
P04436 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
P04436 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.34■□□□□ 0.37
P04436 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
P04436 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
P04436 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
P04436 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
P04436 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 622.4 ms