Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.42■□□□□ 0.54
KRT6AP02538 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.42■□□□□ 0.54
KRT6AP02538 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.42■□□□□ 0.54
KRT6AP02538 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KRT6AP02538 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.42■□□□□ 0.54
KRT6AP02538 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.42■□□□□ 0.54
KRT6AP02538 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.42■□□□□ 0.54
KRT6AP02538 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
KRT6AP02538 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
KRT6AP02538 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.42■□□□□ 0.54
KRT6AP02538 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.42■□□□□ 0.54
KRT6AP02538 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
KRT6AP02538 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.42■□□□□ 0.54
KRT6AP02538 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
KRT6AP02538 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
KRT6AP02538 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRT6AP02538 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRT6AP02538 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.41■□□□□ 0.54
KRT6AP02538 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.41■□□□□ 0.54
KRT6AP02538 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRT6AP02538 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
KRT6AP02538 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRT6AP02538 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRT6AP02538 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.41■□□□□ 0.54
KRT6AP02538 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRT6AP02538 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
KRT6AP02538 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.41■□□□□ 0.54
KRT6AP02538 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.41■□□□□ 0.54
KRT6AP02538 KRT18P6-201ENST00000555540 1265 ntBASIC18.41■□□□□ 0.54
KRT6AP02538 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRT6AP02538 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.41■□□□□ 0.54
KRT6AP02538 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.41■□□□□ 0.54
KRT6AP02538 AL023875.1-201ENST00000640777 796 ntBASIC18.41■□□□□ 0.54
KRT6AP02538 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRT6AP02538 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
KRT6AP02538 AC093525.10-201ENST00000625130 1569 ntBASIC18.41■□□□□ 0.54
KRT6AP02538 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KRT6AP02538 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRT6AP02538 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KRT6AP02538 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRT6AP02538 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KRT6AP02538 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRT6AP02538 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
KRT6AP02538 Z98044.1-201ENST00000632503 1764 ntBASIC18.4■□□□□ 0.54
KRT6AP02538 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
KRT6AP02538 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRT6AP02538 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRT6AP02538 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRT6AP02538 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
KRT6AP02538 KRASP1-201ENST00000407852 552 ntBASIC18.4■□□□□ 0.54
KRT6AP02538 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.4■□□□□ 0.54
KRT6AP02538 KRT16P5-201ENST00000455284 522 ntBASIC18.4■□□□□ 0.54
KRT6AP02538 AC233263.1-201ENST00000578059 224 ntBASIC18.4■□□□□ 0.54
KRT6AP02538 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.4■□□□□ 0.54
KRT6AP02538 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRT6AP02538 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRT6AP02538 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
KRT6AP02538 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRT6AP02538 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.4■□□□□ 0.54
KRT6AP02538 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRT6AP02538 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
KRT6AP02538 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRT6AP02538 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRT6AP02538 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.4■□□□□ 0.54
KRT6AP02538 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRT6AP02538 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
KRT6AP02538 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
KRT6AP02538 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.39■□□□□ 0.54
KRT6AP02538 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
KRT6AP02538 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.39■□□□□ 0.54
KRT6AP02538 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
KRT6AP02538 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
KRT6AP02538 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT6AP02538 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.39■□□□□ 0.53
KRT6AP02538 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.39■□□□□ 0.53
KRT6AP02538 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRT6AP02538 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
KRT6AP02538 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.39■□□□□ 0.53
KRT6AP02538 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT6AP02538 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT6AP02538 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT6AP02538 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.39■□□□□ 0.53
KRT6AP02538 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.39■□□□□ 0.53
KRT6AP02538 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRT6AP02538 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT6AP02538 ESRRAP1-201ENST00000400596 1257 ntBASIC18.39■□□□□ 0.53
KRT6AP02538 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.39■□□□□ 0.53
KRT6AP02538 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRT6AP02538 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT6AP02538 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.39■□□□□ 0.53
KRT6AP02538 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT6AP02538 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
KRT6AP02538 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.39■□□□□ 0.53
KRT6AP02538 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.39■□□□□ 0.53
KRT6AP02538 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.39■□□□□ 0.53
KRT6AP02538 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT6AP02538 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT6AP02538 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.39■□□□□ 0.53
KRT6AP02538 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT6AP02538 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms