Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC22.04■■□□□ 1.12
CTDNEP1O95476 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
CTDNEP1O95476 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CTDNEP1O95476 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC22.04■■□□□ 1.12
CTDNEP1O95476 CKBP1-201ENST00000565489 1086 ntBASIC22.04■■□□□ 1.12
CTDNEP1O95476 AC233702.5-201ENST00000584107 538 ntBASIC22.04■■□□□ 1.12
CTDNEP1O95476 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC22.04■■□□□ 1.12
CTDNEP1O95476 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC22.04■■□□□ 1.12
CTDNEP1O95476 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC22.04■■□□□ 1.12
CTDNEP1O95476 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
CTDNEP1O95476 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CTDNEP1O95476 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
CTDNEP1O95476 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
CTDNEP1O95476 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC22.04■■□□□ 1.12
CTDNEP1O95476 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC22.04■■□□□ 1.12
CTDNEP1O95476 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
CTDNEP1O95476 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CTDNEP1O95476 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC22.03■■□□□ 1.12
CTDNEP1O95476 SNAI3-AS1-205ENST00000568633 2096 ntBASIC22.03■■□□□ 1.12
CTDNEP1O95476 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CTDNEP1O95476 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC22.03■■□□□ 1.12
CTDNEP1O95476 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CTDNEP1O95476 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CTDNEP1O95476 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
CTDNEP1O95476 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
CTDNEP1O95476 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CTDNEP1O95476 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CTDNEP1O95476 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CTDNEP1O95476 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC22.03■■□□□ 1.12
CTDNEP1O95476 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.03■■□□□ 1.12
CTDNEP1O95476 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC22.03■■□□□ 1.12
CTDNEP1O95476 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC22.03■■□□□ 1.12
CTDNEP1O95476 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CTDNEP1O95476 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CTDNEP1O95476 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC22.03■■□□□ 1.12
CTDNEP1O95476 ANO7L1-203ENST00000602586 1720 ntBASIC22.03■■□□□ 1.12
CTDNEP1O95476 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CTDNEP1O95476 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CTDNEP1O95476 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC22.03■■□□□ 1.12
CTDNEP1O95476 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC22.02■■□□□ 1.12
CTDNEP1O95476 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC22.02■■□□□ 1.12
CTDNEP1O95476 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC22.02■■□□□ 1.12
CTDNEP1O95476 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CTDNEP1O95476 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CTDNEP1O95476 AC116562.2-201ENST00000507042 360 ntBASIC22.02■■□□□ 1.12
CTDNEP1O95476 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CTDNEP1O95476 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC22.02■■□□□ 1.12
CTDNEP1O95476 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC22.02■■□□□ 1.12
CTDNEP1O95476 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CTDNEP1O95476 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
CTDNEP1O95476 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC22.02■■□□□ 1.12
CTDNEP1O95476 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CTDNEP1O95476 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CTDNEP1O95476 MME-217ENST00000616757 1315 ntTSL 5 BASIC22.02■■□□□ 1.12
CTDNEP1O95476 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC22.02■■□□□ 1.12
CTDNEP1O95476 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC22.02■■□□□ 1.12
CTDNEP1O95476 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
CTDNEP1O95476 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC22.02■■□□□ 1.11
CTDNEP1O95476 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC22.02■■□□□ 1.11
CTDNEP1O95476 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
CTDNEP1O95476 MTMR9LP-203ENST00000426597 1545 ntBASIC22.01■■□□□ 1.11
CTDNEP1O95476 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CTDNEP1O95476 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC22.01■■□□□ 1.11
CTDNEP1O95476 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CTDNEP1O95476 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC22.01■■□□□ 1.11
CTDNEP1O95476 AL135905.2-201ENST00000584934 1404 ntBASIC22.01■■□□□ 1.11
CTDNEP1O95476 FAM207BP-201ENST00000447172 505 ntBASIC22.01■■□□□ 1.11
CTDNEP1O95476 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC22.01■■□□□ 1.11
CTDNEP1O95476 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC22.01■■□□□ 1.11
CTDNEP1O95476 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC22.01■■□□□ 1.11
CTDNEP1O95476 AP000692.2-201ENST00000608391 879 ntBASIC22.01■■□□□ 1.11
CTDNEP1O95476 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC22.01■■□□□ 1.11
CTDNEP1O95476 AC068587.9-201ENST00000641814 219 ntBASIC22.01■■□□□ 1.11
CTDNEP1O95476 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CTDNEP1O95476 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC22.01■■□□□ 1.11
CTDNEP1O95476 COBL-210ENST00000632460 1941 ntTSL 5 BASIC22.01■■□□□ 1.11
CTDNEP1O95476 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CTDNEP1O95476 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CTDNEP1O95476 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC22.01■■□□□ 1.11
CTDNEP1O95476 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
CTDNEP1O95476 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
CTDNEP1O95476 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC22.01■■□□□ 1.11
CTDNEP1O95476 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
CTDNEP1O95476 NFYC-AS1-201ENST00000606277 1687 ntBASIC22.01■■□□□ 1.11
CTDNEP1O95476 HEIH-201ENST00000623091 1652 ntBASIC22.01■■□□□ 1.11
CTDNEP1O95476 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CTDNEP1O95476 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CTDNEP1O95476 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CTDNEP1O95476 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC22■■□□□ 1.11
CTDNEP1O95476 KRT8P3-201ENST00000519669 1449 ntBASIC22■■□□□ 1.11
CTDNEP1O95476 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CTDNEP1O95476 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC22■■□□□ 1.11
CTDNEP1O95476 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CTDNEP1O95476 AC012618.2-201ENST00000428058 849 ntBASIC22■■□□□ 1.11
CTDNEP1O95476 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22■■□□□ 1.11
CTDNEP1O95476 NUDT16P1-203ENST00000513809 620 ntBASIC22■■□□□ 1.11
CTDNEP1O95476 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC22■■□□□ 1.11
CTDNEP1O95476 USP36-216ENST00000589424 970 ntTSL 5 BASIC22■■□□□ 1.11
CTDNEP1O95476 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC22■■□□□ 1.11
CTDNEP1O95476 AL049637.2-201ENST00000641778 930 ntBASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms