Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.78■□□□□ 0.28
ALX3O95076 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.78■□□□□ 0.28
ALX3O95076 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.78■□□□□ 0.28
ALX3O95076 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.78■□□□□ 0.28
ALX3O95076 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ALX3O95076 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ALX3O95076 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALX3O95076 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALX3O95076 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ALX3O95076 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ALX3O95076 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.78■□□□□ 0.28
ALX3O95076 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ALX3O95076 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.78■□□□□ 0.28
ALX3O95076 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
ALX3O95076 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALX3O95076 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ALX3O95076 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALX3O95076 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.78■□□□□ 0.28
ALX3O95076 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ALX3O95076 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.78■□□□□ 0.28
ALX3O95076 AL354751.1-201ENST00000412768 1863 ntBASIC16.78■□□□□ 0.28
ALX3O95076 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ALX3O95076 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.78■□□□□ 0.28
ALX3O95076 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
ALX3O95076 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ALX3O95076 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
ALX3O95076 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.77■□□□□ 0.28
ALX3O95076 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.77■□□□□ 0.28
ALX3O95076 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ALX3O95076 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ALX3O95076 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ALX3O95076 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ALX3O95076 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
ALX3O95076 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.77■□□□□ 0.28
ALX3O95076 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ALX3O95076 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.77■□□□□ 0.28
ALX3O95076 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.77■□□□□ 0.28
ALX3O95076 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.77■□□□□ 0.28
ALX3O95076 AC080038.1-201ENST00000611274 1154 ntBASIC16.77■□□□□ 0.28
ALX3O95076 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ALX3O95076 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
ALX3O95076 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.77■□□□□ 0.28
ALX3O95076 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ALX3O95076 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ALX3O95076 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
ALX3O95076 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
ALX3O95076 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
ALX3O95076 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.77■□□□□ 0.27
ALX3O95076 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
ALX3O95076 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.77■□□□□ 0.27
ALX3O95076 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ALX3O95076 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALX3O95076 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALX3O95076 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALX3O95076 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
ALX3O95076 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.76■□□□□ 0.27
ALX3O95076 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALX3O95076 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALX3O95076 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
ALX3O95076 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALX3O95076 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.76■□□□□ 0.27
ALX3O95076 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALX3O95076 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALX3O95076 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.76■□□□□ 0.27
ALX3O95076 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALX3O95076 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALX3O95076 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALX3O95076 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ALX3O95076 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.76■□□□□ 0.27
ALX3O95076 AC105036.2-201ENST00000569468 176 ntBASIC16.76■□□□□ 0.27
ALX3O95076 AC073111.5-205ENST00000641717 521 ntBASIC16.76■□□□□ 0.27
ALX3O95076 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALX3O95076 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.76■□□□□ 0.27
ALX3O95076 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.76■□□□□ 0.27
ALX3O95076 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALX3O95076 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.76■□□□□ 0.27
ALX3O95076 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALX3O95076 AC067852.2-201ENST00000590513 2313 ntBASIC16.76■□□□□ 0.27
ALX3O95076 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALX3O95076 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALX3O95076 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALX3O95076 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
ALX3O95076 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
ALX3O95076 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALX3O95076 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.76■□□□□ 0.27
ALX3O95076 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
ALX3O95076 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALX3O95076 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ALX3O95076 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALX3O95076 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALX3O95076 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ALX3O95076 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ALX3O95076 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ALX3O95076 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ALX3O95076 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ALX3O95076 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ALX3O95076 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
ALX3O95076 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.75■□□□□ 0.27
ALX3O95076 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ALX3O95076 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms