Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLPXO76031 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLPXO76031 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CLPXO76031 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLPXO76031 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLPXO76031 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CLPXO76031 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.24■□□□□ 0.35
CLPXO76031 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.24■□□□□ 0.35
CLPXO76031 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLPXO76031 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CLPXO76031 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLPXO76031 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLPXO76031 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.24■□□□□ 0.35
CLPXO76031 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLPXO76031 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.24■□□□□ 0.35
CLPXO76031 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
CLPXO76031 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLPXO76031 AC016769.1-201ENST00000409132 1010 ntBASIC17.24■□□□□ 0.35
CLPXO76031 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.24■□□□□ 0.35
CLPXO76031 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLPXO76031 AP001160.3-201ENST00000601484 763 ntBASIC17.24■□□□□ 0.35
CLPXO76031 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CLPXO76031 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLPXO76031 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.24■□□□□ 0.35
CLPXO76031 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.24■□□□□ 0.35
CLPXO76031 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.24■□□□□ 0.35
CLPXO76031 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLPXO76031 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLPXO76031 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLPXO76031 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CLPXO76031 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.24■□□□□ 0.35
CLPXO76031 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLPXO76031 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLPXO76031 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CLPXO76031 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CLPXO76031 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLPXO76031 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLPXO76031 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLPXO76031 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.23■□□□□ 0.35
CLPXO76031 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLPXO76031 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLPXO76031 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLPXO76031 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
CLPXO76031 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLPXO76031 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CLPXO76031 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLPXO76031 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.23■□□□□ 0.35
CLPXO76031 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLPXO76031 HLA-L-209ENST00000420110 1011 ntBASIC17.23■□□□□ 0.35
CLPXO76031 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.23■□□□□ 0.35
CLPXO76031 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CLPXO76031 AC137761.2-201ENST00000561729 223 ntBASIC17.23■□□□□ 0.35
CLPXO76031 AC145350.3-201ENST00000569033 163 ntBASIC17.23■□□□□ 0.35
CLPXO76031 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLPXO76031 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLPXO76031 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLPXO76031 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLPXO76031 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLPXO76031 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CLPXO76031 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLPXO76031 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLPXO76031 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLPXO76031 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLPXO76031 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLPXO76031 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLPXO76031 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLPXO76031 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.23■□□□□ 0.35
CLPXO76031 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLPXO76031 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLPXO76031 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLPXO76031 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLPXO76031 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.22■□□□□ 0.35
CLPXO76031 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.22■□□□□ 0.35
CLPXO76031 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLPXO76031 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.22■□□□□ 0.35
CLPXO76031 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLPXO76031 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLPXO76031 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLPXO76031 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLPXO76031 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLPXO76031 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.22■□□□□ 0.35
CLPXO76031 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CLPXO76031 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.22■□□□□ 0.35
CLPXO76031 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.22■□□□□ 0.35
CLPXO76031 KRT18P61-201ENST00000585825 1298 ntBASIC17.22■□□□□ 0.35
CLPXO76031 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLPXO76031 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.22■□□□□ 0.35
CLPXO76031 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLPXO76031 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLPXO76031 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLPXO76031 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLPXO76031 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CLPXO76031 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CLPXO76031 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLPXO76031 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CLPXO76031 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.21■□□□□ 0.35
CLPXO76031 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLPXO76031 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.21■□□□□ 0.35
CLPXO76031 AC134043.2-201ENST00000624206 2238 ntBASIC17.21■□□□□ 0.35
CLPXO76031 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms