Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.93■□□□□ 0.46
URB1O60287 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
URB1O60287 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
URB1O60287 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
URB1O60287 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
URB1O60287 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
URB1O60287 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
URB1O60287 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
URB1O60287 DPP3P2-201ENST00000416030 1696 ntBASIC17.93■□□□□ 0.46
URB1O60287 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
URB1O60287 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.93■□□□□ 0.46
URB1O60287 AL162741.1-201ENST00000565563 1558 ntBASIC17.93■□□□□ 0.46
URB1O60287 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
URB1O60287 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
URB1O60287 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.93■□□□□ 0.46
URB1O60287 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
URB1O60287 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.93■□□□□ 0.46
URB1O60287 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
URB1O60287 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
URB1O60287 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.93■□□□□ 0.46
URB1O60287 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
URB1O60287 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
URB1O60287 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
URB1O60287 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.93■□□□□ 0.46
URB1O60287 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.93■□□□□ 0.46
URB1O60287 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
URB1O60287 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
URB1O60287 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
URB1O60287 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
URB1O60287 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.92■□□□□ 0.46
URB1O60287 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.92■□□□□ 0.46
URB1O60287 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.92■□□□□ 0.46
URB1O60287 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
URB1O60287 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
URB1O60287 AC092865.5-201ENST00000545435 363 ntBASIC17.92■□□□□ 0.46
URB1O60287 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
URB1O60287 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
URB1O60287 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
URB1O60287 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
URB1O60287 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
URB1O60287 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
URB1O60287 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
URB1O60287 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
URB1O60287 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
URB1O60287 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.92■□□□□ 0.46
URB1O60287 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
URB1O60287 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.92■□□□□ 0.46
URB1O60287 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
URB1O60287 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
URB1O60287 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
URB1O60287 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
URB1O60287 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.92■□□□□ 0.46
URB1O60287 AC092183.1-201ENST00000469884 875 ntBASIC17.92■□□□□ 0.46
URB1O60287 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
URB1O60287 KRT8P26-201ENST00000534154 1276 ntBASIC17.92■□□□□ 0.46
URB1O60287 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.92■□□□□ 0.46
URB1O60287 AL121772.3-201ENST00000610840 674 ntBASIC17.92■□□□□ 0.46
URB1O60287 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.92■□□□□ 0.46
URB1O60287 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
URB1O60287 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
URB1O60287 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
URB1O60287 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
URB1O60287 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
URB1O60287 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
URB1O60287 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
URB1O60287 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
URB1O60287 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.91■□□□□ 0.46
URB1O60287 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
URB1O60287 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
URB1O60287 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
URB1O60287 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
URB1O60287 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
URB1O60287 FAM220CP-201ENST00000395253 831 ntBASIC17.91■□□□□ 0.46
URB1O60287 MIR1233-2-201ENST00000408138 82 ntBASIC17.91■□□□□ 0.46
URB1O60287 MIR1233-1-201ENST00000408722 82 ntBASIC17.91■□□□□ 0.46
URB1O60287 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.91■□□□□ 0.46
URB1O60287 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.91■□□□□ 0.46
URB1O60287 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.91■□□□□ 0.46
URB1O60287 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
URB1O60287 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.91■□□□□ 0.46
URB1O60287 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
URB1O60287 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
URB1O60287 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
URB1O60287 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.91■□□□□ 0.46
URB1O60287 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
URB1O60287 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
URB1O60287 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
URB1O60287 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
URB1O60287 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
URB1O60287 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
URB1O60287 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
URB1O60287 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
URB1O60287 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.91■□□□□ 0.46
URB1O60287 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
URB1O60287 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.91■□□□□ 0.46
URB1O60287 TSPY22P-201ENST00000427496 604 ntBASIC17.91■□□□□ 0.46
URB1O60287 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.91■□□□□ 0.46
URB1O60287 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
URB1O60287 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.91■□□□□ 0.46
URB1O60287 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms