Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.79■□□□□ 0.28
SGCEO43556 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SGCEO43556 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SGCEO43556 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.79■□□□□ 0.28
SGCEO43556 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.79■□□□□ 0.28
SGCEO43556 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SGCEO43556 HTR7P1-201ENST00000538670 1336 ntBASIC16.79■□□□□ 0.28
SGCEO43556 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SGCEO43556 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SGCEO43556 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
SGCEO43556 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SGCEO43556 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SGCEO43556 AP002982.1-201ENST00000492365 877 ntBASIC16.79■□□□□ 0.28
SGCEO43556 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.79■□□□□ 0.28
SGCEO43556 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.79■□□□□ 0.28
SGCEO43556 AL359736.2-201ENST00000621992 437 ntBASIC16.79■□□□□ 0.28
SGCEO43556 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SGCEO43556 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
SGCEO43556 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SGCEO43556 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SGCEO43556 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
SGCEO43556 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.79■□□□□ 0.28
SGCEO43556 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SGCEO43556 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SGCEO43556 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SGCEO43556 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
SGCEO43556 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SGCEO43556 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SGCEO43556 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.78■□□□□ 0.28
SGCEO43556 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SGCEO43556 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SGCEO43556 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.78■□□□□ 0.28
SGCEO43556 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.78■□□□□ 0.28
SGCEO43556 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SGCEO43556 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SGCEO43556 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.78■□□□□ 0.28
SGCEO43556 AL353807.1-201ENST00000427475 662 ntBASIC16.78■□□□□ 0.28
SGCEO43556 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.78■□□□□ 0.28
SGCEO43556 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SGCEO43556 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.78■□□□□ 0.28
SGCEO43556 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.78■□□□□ 0.28
SGCEO43556 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.78■□□□□ 0.28
SGCEO43556 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.78■□□□□ 0.28
SGCEO43556 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SGCEO43556 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SGCEO43556 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SGCEO43556 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SGCEO43556 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SGCEO43556 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SGCEO43556 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SGCEO43556 AL161938.1-201ENST00000569833 2180 ntBASIC16.78■□□□□ 0.28
SGCEO43556 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SGCEO43556 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SGCEO43556 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SGCEO43556 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SGCEO43556 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SGCEO43556 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.78■□□□□ 0.28
SGCEO43556 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SGCEO43556 AC098818.2-201ENST00000564925 2320 ntBASIC16.78■□□□□ 0.28
SGCEO43556 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SGCEO43556 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SGCEO43556 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
SGCEO43556 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SGCEO43556 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.77■□□□□ 0.28
SGCEO43556 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SGCEO43556 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SGCEO43556 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
SGCEO43556 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SGCEO43556 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.77■□□□□ 0.28
SGCEO43556 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SGCEO43556 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SGCEO43556 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SGCEO43556 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SGCEO43556 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SGCEO43556 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.77■□□□□ 0.28
SGCEO43556 PRORSD1P-201ENST00000295112 541 ntBASIC16.77■□□□□ 0.28
SGCEO43556 NIFKP9-201ENST00000419265 221 ntBASIC16.77■□□□□ 0.28
SGCEO43556 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SGCEO43556 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.77■□□□□ 0.28
SGCEO43556 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SGCEO43556 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SGCEO43556 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SGCEO43556 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
SGCEO43556 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SGCEO43556 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.77■□□□□ 0.28
SGCEO43556 AL353708.3-201ENST00000610272 989 ntBASIC16.77■□□□□ 0.28
SGCEO43556 AL445675.2-201ENST00000620291 557 ntBASIC16.77■□□□□ 0.28
SGCEO43556 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SGCEO43556 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.77■□□□□ 0.28
SGCEO43556 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.77■□□□□ 0.27
SGCEO43556 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
SGCEO43556 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SGCEO43556 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SGCEO43556 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SGCEO43556 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SGCEO43556 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SGCEO43556 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SGCEO43556 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SGCEO43556 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.76■□□□□ 0.27
SGCEO43556 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms