Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NDUFS4O43181 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NDUFS4O43181 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NDUFS4O43181 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.22■□□□□ 0.51
NDUFS4O43181 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NDUFS4O43181 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NDUFS4O43181 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
NDUFS4O43181 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
NDUFS4O43181 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NDUFS4O43181 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NDUFS4O43181 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.22■□□□□ 0.51
NDUFS4O43181 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.21■□□□□ 0.51
NDUFS4O43181 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NDUFS4O43181 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NDUFS4O43181 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.21■□□□□ 0.51
NDUFS4O43181 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NDUFS4O43181 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NDUFS4O43181 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
NDUFS4O43181 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NDUFS4O43181 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NDUFS4O43181 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
NDUFS4O43181 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NDUFS4O43181 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
NDUFS4O43181 AC097488.1-201ENST00000507834 756 ntBASIC18.21■□□□□ 0.51
NDUFS4O43181 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NDUFS4O43181 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.21■□□□□ 0.51
NDUFS4O43181 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.21■□□□□ 0.51
NDUFS4O43181 AP000525.1-201ENST00000608286 694 ntBASIC18.21■□□□□ 0.51
NDUFS4O43181 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.21■□□□□ 0.51
NDUFS4O43181 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NDUFS4O43181 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NDUFS4O43181 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NDUFS4O43181 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NDUFS4O43181 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.21■□□□□ 0.51
NDUFS4O43181 AC098818.2-201ENST00000564925 2320 ntBASIC18.21■□□□□ 0.51
NDUFS4O43181 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NDUFS4O43181 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NDUFS4O43181 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.2■□□□□ 0.5
NDUFS4O43181 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NDUFS4O43181 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NDUFS4O43181 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
NDUFS4O43181 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.2■□□□□ 0.5
NDUFS4O43181 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NDUFS4O43181 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NDUFS4O43181 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NDUFS4O43181 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.2■□□□□ 0.5
NDUFS4O43181 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.2■□□□□ 0.5
NDUFS4O43181 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.2■□□□□ 0.5
NDUFS4O43181 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.2■□□□□ 0.5
NDUFS4O43181 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
NDUFS4O43181 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.2■□□□□ 0.5
NDUFS4O43181 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.2■□□□□ 0.5
NDUFS4O43181 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NDUFS4O43181 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NDUFS4O43181 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NDUFS4O43181 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.2■□□□□ 0.5
NDUFS4O43181 FEM1AP3-201ENST00000403722 1741 ntBASIC18.2■□□□□ 0.5
NDUFS4O43181 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NDUFS4O43181 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NDUFS4O43181 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NDUFS4O43181 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NDUFS4O43181 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFS4O43181 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFS4O43181 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.19■□□□□ 0.5
NDUFS4O43181 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.19■□□□□ 0.5
NDUFS4O43181 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFS4O43181 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFS4O43181 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFS4O43181 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
NDUFS4O43181 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFS4O43181 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.19■□□□□ 0.5
NDUFS4O43181 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
NDUFS4O43181 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFS4O43181 MFAP1P1-201ENST00000442257 1255 ntBASIC18.19■□□□□ 0.5
NDUFS4O43181 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFS4O43181 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.19■□□□□ 0.5
NDUFS4O43181 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
NDUFS4O43181 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFS4O43181 CKBP1-201ENST00000565489 1086 ntBASIC18.19■□□□□ 0.5
NDUFS4O43181 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.19■□□□□ 0.5
NDUFS4O43181 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.19■□□□□ 0.5
NDUFS4O43181 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
NDUFS4O43181 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.19■□□□□ 0.5
NDUFS4O43181 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.19■□□□□ 0.5
NDUFS4O43181 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFS4O43181 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
NDUFS4O43181 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
NDUFS4O43181 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
NDUFS4O43181 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFS4O43181 AC096733.2-201ENST00000609937 1394 ntBASIC18.18■□□□□ 0.5
NDUFS4O43181 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NDUFS4O43181 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
NDUFS4O43181 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFS4O43181 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFS4O43181 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NDUFS4O43181 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFS4O43181 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFS4O43181 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFS4O43181 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFS4O43181 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms