Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
NPC1O15118 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPC1O15118 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPC1O15118 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.18■□□□□ 0.66
NPC1O15118 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.18■□□□□ 0.66
NPC1O15118 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPC1O15118 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPC1O15118 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.18■□□□□ 0.66
NPC1O15118 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.18■□□□□ 0.66
NPC1O15118 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NPC1O15118 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.18■□□□□ 0.66
NPC1O15118 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.18■□□□□ 0.66
NPC1O15118 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPC1O15118 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.18■□□□□ 0.66
NPC1O15118 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
NPC1O15118 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NPC1O15118 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPC1O15118 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.18■□□□□ 0.66
NPC1O15118 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.18■□□□□ 0.66
NPC1O15118 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPC1O15118 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPC1O15118 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.17■□□□□ 0.66
NPC1O15118 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NPC1O15118 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.17■□□□□ 0.66
NPC1O15118 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPC1O15118 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPC1O15118 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.17■□□□□ 0.66
NPC1O15118 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NPC1O15118 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.17■□□□□ 0.66
NPC1O15118 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NPC1O15118 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.17■□□□□ 0.66
NPC1O15118 AC112907.2-201ENST00000448639 330 ntBASIC19.17■□□□□ 0.66
NPC1O15118 KRT18P38-201ENST00000449496 1282 ntBASIC19.17■□□□□ 0.66
NPC1O15118 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.17■□□□□ 0.66
NPC1O15118 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.17■□□□□ 0.66
NPC1O15118 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPC1O15118 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.17■□□□□ 0.66
NPC1O15118 AC116407.4-201ENST00000623319 1061 ntBASIC19.17■□□□□ 0.66
NPC1O15118 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NPC1O15118 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPC1O15118 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPC1O15118 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NPC1O15118 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NPC1O15118 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.17■□□□□ 0.66
NPC1O15118 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NPC1O15118 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1O15118 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1O15118 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1O15118 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NPC1O15118 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1O15118 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.16■□□□□ 0.66
NPC1O15118 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1O15118 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1O15118 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.16■□□□□ 0.66
NPC1O15118 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1O15118 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.16■□□□□ 0.66
NPC1O15118 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1O15118 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1O15118 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1O15118 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NPC1O15118 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1O15118 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1O15118 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1O15118 MCCD1P1-208ENST00000445732 328 ntBASIC19.16■□□□□ 0.66
NPC1O15118 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1O15118 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1O15118 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1O15118 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1O15118 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.16■□□□□ 0.66
NPC1O15118 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
NPC1O15118 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1O15118 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
NPC1O15118 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
NPC1O15118 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1O15118 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1O15118 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
NPC1O15118 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.16■□□□□ 0.66
NPC1O15118 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1O15118 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPC1O15118 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NPC1O15118 GPAT2P1-201ENST00000444924 1672 ntBASIC19.15■□□□□ 0.66
NPC1O15118 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPC1O15118 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.15■□□□□ 0.66
NPC1O15118 AL023284.2-201ENST00000405850 579 ntBASIC19.15■□□□□ 0.66
NPC1O15118 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NPC1O15118 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NPC1O15118 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NPC1O15118 VENTXP5-201ENST00000523979 775 ntBASIC19.15■□□□□ 0.66
NPC1O15118 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPC1O15118 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NPC1O15118 ZNF444P1-201ENST00000559497 298 ntBASIC19.15■□□□□ 0.66
NPC1O15118 MIR3180-5-201ENST00000583743 153 ntBASIC19.15■□□□□ 0.66
NPC1O15118 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NPC1O15118 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPC1O15118 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
NPC1O15118 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPC1O15118 AC005332.1-201ENST00000577698 1310 ntBASIC19.15■□□□□ 0.66
NPC1O15118 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NPC1O15118 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPC1O15118 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms