Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.06■□□□□ 0.8
CLDN5O00501 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN5O00501 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN5O00501 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN5O00501 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN5O00501 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN5O00501 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN5O00501 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.05■□□□□ 0.8
CLDN5O00501 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN5O00501 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.05■□□□□ 0.8
CLDN5O00501 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.05■□□□□ 0.8
CLDN5O00501 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN5O00501 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.05■□□□□ 0.8
CLDN5O00501 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN5O00501 LIN28AP1-201ENST00000429574 405 ntBASIC20.05■□□□□ 0.8
CLDN5O00501 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.05■□□□□ 0.8
CLDN5O00501 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.05■□□□□ 0.8
CLDN5O00501 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CLDN5O00501 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.05■□□□□ 0.8
CLDN5O00501 AC092865.7-201ENST00000641832 219 ntBASIC20.05■□□□□ 0.8
CLDN5O00501 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
CLDN5O00501 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN5O00501 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.05■□□□□ 0.8
CLDN5O00501 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN5O00501 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN5O00501 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.04■□□□□ 0.8
CLDN5O00501 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN5O00501 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.04■□□□□ 0.8
CLDN5O00501 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN5O00501 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CLDN5O00501 AL049812.1-201ENST00000432563 2267 ntBASIC20.04■□□□□ 0.8
CLDN5O00501 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN5O00501 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CLDN5O00501 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN5O00501 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CLDN5O00501 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN5O00501 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.04■□□□□ 0.8
CLDN5O00501 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CLDN5O00501 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.04■□□□□ 0.8
CLDN5O00501 ATP5G1P1-201ENST00000448724 379 ntBASIC20.04■□□□□ 0.8
CLDN5O00501 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.04■□□□□ 0.8
CLDN5O00501 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN5O00501 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN5O00501 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.04■□□□□ 0.8
CLDN5O00501 FP475955.4-201ENST00000623131 1990 ntBASIC20.04■□□□□ 0.8
CLDN5O00501 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN5O00501 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CLDN5O00501 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
CLDN5O00501 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN5O00501 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.03■□□□□ 0.8
CLDN5O00501 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN5O00501 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CLDN5O00501 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN5O00501 KRT8P45-201ENST00000414328 1447 ntBASIC20.03■□□□□ 0.8
CLDN5O00501 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN5O00501 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.03■□□□□ 0.8
CLDN5O00501 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN5O00501 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN5O00501 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN5O00501 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN5O00501 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN5O00501 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN5O00501 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.03■□□□□ 0.8
CLDN5O00501 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.03■□□□□ 0.8
CLDN5O00501 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.03■□□□□ 0.8
CLDN5O00501 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.03■□□□□ 0.8
CLDN5O00501 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.03■□□□□ 0.8
CLDN5O00501 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.03■□□□□ 0.8
CLDN5O00501 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.03■□□□□ 0.8
CLDN5O00501 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN5O00501 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN5O00501 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN5O00501 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CLDN5O00501 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN5O00501 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CLDN5O00501 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CLDN5O00501 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN5O00501 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN5O00501 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN5O00501 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.02■□□□□ 0.8
CLDN5O00501 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.02■□□□□ 0.8
CLDN5O00501 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.02■□□□□ 0.8
CLDN5O00501 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.02■□□□□ 0.8
CLDN5O00501 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.02■□□□□ 0.8
CLDN5O00501 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.02■□□□□ 0.8
CLDN5O00501 GPAT2P1-201ENST00000444924 1672 ntBASIC20.02■□□□□ 0.8
CLDN5O00501 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.02■□□□□ 0.8
CLDN5O00501 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN5O00501 AL161938.1-201ENST00000569833 2180 ntBASIC20.02■□□□□ 0.8
CLDN5O00501 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.02■□□□□ 0.8
CLDN5O00501 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN5O00501 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLDN5O00501 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.02■□□□□ 0.79
CLDN5O00501 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.02■□□□□ 0.79
CLDN5O00501 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
CLDN5O00501 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CLDN5O00501 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CLDN5O00501 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN5O00501 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN5O00501 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms