Protein–RNA interactions for Protein: O00189

AP4M1, AP-4 complex subunit mu-1, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4M1O00189 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP4M1O00189 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP4M1O00189 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AP4M1O00189 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
AP4M1O00189 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
AP4M1O00189 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP4M1O00189 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP4M1O00189 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC15.66■□□□□ 0.1
AP4M1O00189 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.66■□□□□ 0.1
AP4M1O00189 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.66■□□□□ 0.1
AP4M1O00189 RN7SL471P-201ENST00000580476 299 ntBASIC15.66■□□□□ 0.1
AP4M1O00189 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.66■□□□□ 0.1
AP4M1O00189 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AP4M1O00189 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AP4M1O00189 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
AP4M1O00189 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
AP4M1O00189 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP4M1O00189 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC15.66■□□□□ 0.1
AP4M1O00189 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP4M1O00189 NOC2LP2-201ENST00000407594 1944 ntBASIC15.66■□□□□ 0.1
AP4M1O00189 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.66■□□□□ 0.1
AP4M1O00189 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP4M1O00189 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC15.66■□□□□ 0.1
AP4M1O00189 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP4M1O00189 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC15.66■□□□□ 0.1
AP4M1O00189 AC135050.7-201ENST00000624508 2218 ntBASIC15.66■□□□□ 0.1
AP4M1O00189 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP4M1O00189 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP4M1O00189 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP4M1O00189 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
AP4M1O00189 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP4M1O00189 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP4M1O00189 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.65■□□□□ 0.1
AP4M1O00189 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP4M1O00189 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
AP4M1O00189 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
AP4M1O00189 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP4M1O00189 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
AP4M1O00189 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP4M1O00189 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP4M1O00189 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP4M1O00189 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC15.65■□□□□ 0.1
AP4M1O00189 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
AP4M1O00189 AC239809.2-201ENST00000415381 517 ntBASIC15.65■□□□□ 0.1
AP4M1O00189 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP4M1O00189 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP4M1O00189 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP4M1O00189 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP4M1O00189 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.65■□□□□ 0.1
AP4M1O00189 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP4M1O00189 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.65■□□□□ 0.1
AP4M1O00189 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP4M1O00189 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP4M1O00189 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP4M1O00189 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
AP4M1O00189 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP4M1O00189 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP4M1O00189 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
AP4M1O00189 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP4M1O00189 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
AP4M1O00189 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP4M1O00189 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
AP4M1O00189 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
AP4M1O00189 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.1
AP4M1O00189 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC15.64■□□□□ 0.09
AP4M1O00189 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.64■□□□□ 0.09
AP4M1O00189 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
AP4M1O00189 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.64■□□□□ 0.09
AP4M1O00189 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.64■□□□□ 0.09
AP4M1O00189 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP4M1O00189 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
AP4M1O00189 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
AP4M1O00189 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP4M1O00189 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP4M1O00189 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP4M1O00189 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP4M1O00189 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.64■□□□□ 0.09
AP4M1O00189 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC15.64■□□□□ 0.09
AP4M1O00189 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.64■□□□□ 0.09
AP4M1O00189 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC15.64■□□□□ 0.09
AP4M1O00189 C1QBPP2-201ENST00000528754 825 ntBASIC15.64■□□□□ 0.09
AP4M1O00189 RNF121-214ENST00000533380 870 ntTSL 3 BASIC15.64■□□□□ 0.09
AP4M1O00189 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.64■□□□□ 0.09
AP4M1O00189 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
AP4M1O00189 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.64■□□□□ 0.09
AP4M1O00189 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.64■□□□□ 0.09
AP4M1O00189 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
AP4M1O00189 AC142381.4-202ENST00000563973 229 ntBASIC15.64■□□□□ 0.09
AP4M1O00189 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15.64■□□□□ 0.09
AP4M1O00189 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.64■□□□□ 0.09
AP4M1O00189 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.64■□□□□ 0.09
AP4M1O00189 AC233263.1-201ENST00000578059 224 ntBASIC15.64■□□□□ 0.09
AP4M1O00189 MTDHP1-201ENST00000605323 784 ntBASIC15.64■□□□□ 0.09
AP4M1O00189 FAM197Y4-202ENST00000622692 608 ntBASIC15.64■□□□□ 0.09
AP4M1O00189 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.64■□□□□ 0.09
AP4M1O00189 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
AP4M1O00189 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
AP4M1O00189 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
AP4M1O00189 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
AP4M1O00189 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms