Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCDC189A1A4V9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCDC189A1A4V9 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC189A1A4V9 AC124283.5-201ENST00000624661 1809 ntBASIC19■□□□□ 0.63
CCDC189A1A4V9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC189A1A4V9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC189A1A4V9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC189A1A4V9 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CCDC189A1A4V9 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC189A1A4V9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC189A1A4V9 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19■□□□□ 0.63
CCDC189A1A4V9 TUBB8P6-201ENST00000436895 1288 ntBASIC19■□□□□ 0.63
CCDC189A1A4V9 AC069152.1-201ENST00000438030 544 ntBASIC19■□□□□ 0.63
CCDC189A1A4V9 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19■□□□□ 0.63
CCDC189A1A4V9 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19■□□□□ 0.63
CCDC189A1A4V9 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC189A1A4V9 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC189A1A4V9 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19■□□□□ 0.63
CCDC189A1A4V9 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC189A1A4V9 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC189A1A4V9 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC189A1A4V9 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19■□□□□ 0.63
CCDC189A1A4V9 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CCDC189A1A4V9 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC189A1A4V9 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CCDC189A1A4V9 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCDC189A1A4V9 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CCDC189A1A4V9 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
CCDC189A1A4V9 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC189A1A4V9 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CCDC189A1A4V9 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC189A1A4V9 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC189A1A4V9 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC189A1A4V9 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CCDC189A1A4V9 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC189A1A4V9 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC189A1A4V9 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC189A1A4V9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC189A1A4V9 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC189A1A4V9 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC189A1A4V9 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC189A1A4V9 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC189A1A4V9 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC189A1A4V9 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC189A1A4V9 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC189A1A4V9 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC189A1A4V9 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC189A1A4V9 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCDC189A1A4V9 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC189A1A4V9 AC008687.6-201ENST00000596318 630 ntBASIC18.99■□□□□ 0.63
CCDC189A1A4V9 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC189A1A4V9 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC189A1A4V9 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC189A1A4V9 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC189A1A4V9 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
CCDC189A1A4V9 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC189A1A4V9 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCDC189A1A4V9 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC189A1A4V9 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC189A1A4V9 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC189A1A4V9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC189A1A4V9 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCDC189A1A4V9 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC189A1A4V9 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC189A1A4V9 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC189A1A4V9 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC189A1A4V9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC189A1A4V9 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC189A1A4V9 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC189A1A4V9 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC189A1A4V9 AL138781.2-201ENST00000617896 1843 ntBASIC18.98■□□□□ 0.63
CCDC189A1A4V9 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CCDC189A1A4V9 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC189A1A4V9 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC189A1A4V9 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC189A1A4V9 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC189A1A4V9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC189A1A4V9 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC189A1A4V9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC189A1A4V9 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC189A1A4V9 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC189A1A4V9 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC189A1A4V9 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CCDC189A1A4V9 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC189A1A4V9 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
CCDC189A1A4V9 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC189A1A4V9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CCDC189A1A4V9 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC189A1A4V9 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CCDC189A1A4V9 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC189A1A4V9 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
CCDC189A1A4V9 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC189A1A4V9 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC189A1A4V9 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC189A1A4V9 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CCDC189A1A4V9 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC189A1A4V9 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.97■□□□□ 0.63
CCDC189A1A4V9 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC189A1A4V9 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC189A1A4V9 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms