Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV19A0A0A6YYK7 AL023284.2-201ENST00000405850 579 ntBASIC19.66■□□□□ 0.74
TRAV19A0A0A6YYK7 MCCD1P1-208ENST00000445732 328 ntBASIC19.66■□□□□ 0.74
TRAV19A0A0A6YYK7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.66■□□□□ 0.74
TRAV19A0A0A6YYK7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV19A0A0A6YYK7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV19A0A0A6YYK7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
TRAV19A0A0A6YYK7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
TRAV19A0A0A6YYK7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TRAV19A0A0A6YYK7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV19A0A0A6YYK7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV19A0A0A6YYK7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV19A0A0A6YYK7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.66■□□□□ 0.74
TRAV19A0A0A6YYK7 KRT8P3-201ENST00000519669 1449 ntBASIC19.66■□□□□ 0.74
TRAV19A0A0A6YYK7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV19A0A0A6YYK7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TRAV19A0A0A6YYK7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TRAV19A0A0A6YYK7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV19A0A0A6YYK7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TRAV19A0A0A6YYK7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 STARP1-201ENST00000397973 869 ntBASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 PCED1CP-201ENST00000419887 785 ntBASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 FAM86EP-206ENST00000510506 987 ntBASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.65■□□□□ 0.74
TRAV19A0A0A6YYK7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TRAV19A0A0A6YYK7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.64■□□□□ 0.74
TRAV19A0A0A6YYK7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
TRAV19A0A0A6YYK7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRAV19A0A0A6YYK7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRAV19A0A0A6YYK7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.64■□□□□ 0.74
TRAV19A0A0A6YYK7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV19A0A0A6YYK7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV19A0A0A6YYK7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV19A0A0A6YYK7 AC112907.2-201ENST00000448639 330 ntBASIC19.64■□□□□ 0.73
TRAV19A0A0A6YYK7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.64■□□□□ 0.73
TRAV19A0A0A6YYK7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV19A0A0A6YYK7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
TRAV19A0A0A6YYK7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.64■□□□□ 0.73
TRAV19A0A0A6YYK7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.64■□□□□ 0.73
TRAV19A0A0A6YYK7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.64■□□□□ 0.73
TRAV19A0A0A6YYK7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.64■□□□□ 0.73
TRAV19A0A0A6YYK7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.64■□□□□ 0.73
TRAV19A0A0A6YYK7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV19A0A0A6YYK7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
TRAV19A0A0A6YYK7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TRAV19A0A0A6YYK7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV19A0A0A6YYK7 AC036111.1-201ENST00000533973 1582 ntBASIC19.64■□□□□ 0.73
TRAV19A0A0A6YYK7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV19A0A0A6YYK7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV19A0A0A6YYK7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV19A0A0A6YYK7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV19A0A0A6YYK7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.64■□□□□ 0.73
TRAV19A0A0A6YYK7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.64■□□□□ 0.73
TRAV19A0A0A6YYK7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.64■□□□□ 0.73
TRAV19A0A0A6YYK7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV19A0A0A6YYK7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
TRAV19A0A0A6YYK7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV19A0A0A6YYK7 PCDHAC2-203ENST00000615316 3011 ntBASIC19.64■□□□□ 0.73
TRAV19A0A0A6YYK7 AC125437.2-201ENST00000625180 2167 ntBASIC19.63■□□□□ 0.73
TRAV19A0A0A6YYK7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.63■□□□□ 0.73
TRAV19A0A0A6YYK7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.63■□□□□ 0.73
TRAV19A0A0A6YYK7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV19A0A0A6YYK7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV19A0A0A6YYK7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV19A0A0A6YYK7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.63■□□□□ 0.73
TRAV19A0A0A6YYK7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV19A0A0A6YYK7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV19A0A0A6YYK7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.63■□□□□ 0.73
TRAV19A0A0A6YYK7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV19A0A0A6YYK7 IER3-202ENST00000376377 1350 ntBASIC19.63■□□□□ 0.73
TRAV19A0A0A6YYK7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms