Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
RSPO4Q2I0M5 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.27□□□□□ -1.73
RSPO4Q2I0M5 RNU6-763P-201ENST00000390865 106 ntBASIC4.27□□□□□ -1.73
RSPO4Q2I0M5 CYCSP32-201ENST00000440548 321 ntBASIC4.27□□□□□ -1.73
RSPO4Q2I0M5 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.27□□□□□ -1.73
RSPO4Q2I0M5 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.27□□□□□ -1.73
RSPO4Q2I0M5 U8.19-201ENST00000459095 133 ntBASIC4.27□□□□□ -1.73
RSPO4Q2I0M5 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.27□□□□□ -1.73
RSPO4Q2I0M5 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.27□□□□□ -1.73
RSPO4Q2I0M5 AF186996.7-201ENST00000492781 209 ntBASIC4.27□□□□□ -1.73
RSPO4Q2I0M5 RNU6-927P-201ENST00000516199 100 ntBASIC4.27□□□□□ -1.73
RSPO4Q2I0M5 RNA5SP471-201ENST00000516971 106 ntBASIC4.27□□□□□ -1.73
RSPO4Q2I0M5 UBL5P4-201ENST00000562584 236 ntBASIC4.27□□□□□ -1.73
RSPO4Q2I0M5 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.27□□□□□ -1.73
RSPO4Q2I0M5 MIR5195-201ENST00000583555 115 ntBASIC4.27□□□□□ -1.73
RSPO4Q2I0M5 AC005000.2-201ENST00000605468 310 ntBASIC4.27□□□□□ -1.73
RSPO4Q2I0M5 MIR1245B-201ENST00000636115 69 ntBASIC4.27□□□□□ -1.73
RSPO4Q2I0M5 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
RSPO4Q2I0M5 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RSPO4Q2I0M5 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
RSPO4Q2I0M5 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.27□□□□□ -1.73
RSPO4Q2I0M5 ZNF702P-202ENST00000434269 1966 ntBASIC4.27□□□□□ -1.73
RSPO4Q2I0M5 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.27□□□□□ -1.73
RSPO4Q2I0M5 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RSPO4Q2I0M5 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RSPO4Q2I0M5 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.27□□□□□ -1.73
RSPO4Q2I0M5 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.27□□□□□ -1.73
RSPO4Q2I0M5 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 RNA5SP72-201ENST00000364442 117 ntBASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 Y_RNA.319-201ENST00000365138 92 ntBASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 RNU6-643P-201ENST00000384018 107 ntBASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 RNU6-905P-201ENST00000384434 107 ntBASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 RNU6-768P-201ENST00000384683 107 ntBASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 MIR10A-201ENST00000385043 110 ntBASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 MTHFD2P2-201ENST00000407725 247 ntBASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 RNU6-588P-201ENST00000410281 105 ntBASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 SSXP9-201ENST00000417503 292 ntBASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 AC099336.2-201ENST00000422457 254 ntBASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 HMGN2P27-201ENST00000427352 270 ntBASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 AC124916.1-201ENST00000444020 547 ntBASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 AC099560.2-201ENST00000457554 255 ntBASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 RPL23AP94-201ENST00000512518 302 ntBASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 AC010265.1-201ENST00000513509 211 ntBASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 RNU1-103P-201ENST00000516502 125 ntBASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 RNU2-60P-201ENST00000517290 128 ntBASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 AC026403.1-201ENST00000518938 295 ntBASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 AC084851.1-201ENST00000529105 249 ntBASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 AC116447.1-201ENST00000613153 453 ntBASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 AL357075.2-201ENST00000614906 189 ntBASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 AL353748.2-201ENST00000622148 471 ntBASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 AC134026.1-201ENST00000623249 2239 ntBASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 AC016588.2-201ENST00000632484 3021 ntBASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
RSPO4Q2I0M5 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 AC104623.2-202ENST00000623477 4002 ntBASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 AC125336.1-201ENST00000508893 2827 ntBASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 AL022322.2-201ENST00000624072 20397 ntBASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 Y_RNA.101-201ENST00000363154 102 ntBASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 MIR626-201ENST00000385032 94 ntBASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 MIR548A3-201ENST00000385297 97 ntBASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 MIR3065-201ENST00000390137 79 ntBASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 AL591034.1-201ENST00000407447 340 ntBASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 RNU2-43P-201ENST00000410306 190 ntBASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 AL627311.1-201ENST00000431514 115 ntBASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 RPL35AP21-201ENST00000437667 333 ntBASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 MRPL48P1-201ENST00000445390 636 ntBASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 Y_RNA.757-201ENST00000578934 114 ntBASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 uc_338.28-201ENST00000612082 187 ntBASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 AC025521.1-201ENST00000621624 286 ntBASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 AL353743.1-202ENST00000431724 1695 ntBASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RSPO4Q2I0M5 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RSPO4Q2I0M5 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms