Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 TRBV12-2-201ENST00000489763 344 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 AC008040.4-201ENST00000494834 768 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 RN7SL869P-201ENST00000497032 300 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 AC008496.1-201ENST00000509131 295 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 KHDC1P1-201ENST00000511053 508 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 SCARNA20.1-201ENST00000516009 138 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 RNU7-79P-201ENST00000516082 62 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 RNU7-160P-201ENST00000516660 62 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 ASB8-204ENST00000536071 568 ntTSL 4 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 AC073916.1-201ENST00000545095 130 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 DNAJC19P9-201ENST00000555084 351 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 DNM1P33-201ENST00000565222 270 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 AC090897.1-201ENST00000580909 226 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 MIR3162-201ENST00000581818 82 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 AC010761.2-202ENST00000582536 391 ntTSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 MIR4428-201ENST00000584884 73 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 AC140658.6-201ENST00000603958 201 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 AC005070.2-201ENST00000604391 260 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 RN7SL778P-201ENST00000607160 297 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 AL031777.2-201ENST00000611953 196 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 pRNA.9-201ENST00000618609 89 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 AC233280.20-201ENST00000637412 416 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 AC139713.2-215ENST00000641428 5037 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 PALLD-206ENST00000505667 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 AC010168.2-201ENST00000562691 5428 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 LRRC37A16P-202ENST00000586022 3725 ntBASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 AC007656.2-201ENST00000624902 4547 ntBASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
KRTAP4-4Q9BYR3 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms